| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00057127m |
| Family | CE10 |
| Protein Properties | Length: 300 Molecular Weight: 33077.3 Isoelectric Point: 5.6721 |
| Chromosome | Chromosome/Scaffold: 0288193 Start: 1 End: 900 |
| Description | alpha/beta-Hydrolases superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE10 | 1 | 211 | 1.1e-38 |
| VVSVEYRLAPEHPIPAAYDDAWSALKWVASFADPWLADYADPARTFLAGDSAGGNIAYHTAVRASQDDGLELGVDIEGMAIVHPYFWGAERLPSEEVWDG AAVFPAYGVDWLWPFVTAGQASNDDPRLNPPEEEIASLTCRRVLVAVAEKDTLRERGCRLLDRFSDYYARTATGGEATLVESEGEDHGFHLYSPLRATSR RLMENIVRFIN | |||
| Full Sequence |
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| Protein Sequence Length: 300 Download |
| VVSVEYRLAP EHPIPAAYDD AWSALKWVAS FADPWLADYA DPARTFLAGD SAGGNIAYHT 60 AVRASQDDGL ELGVDIEGMA IVHPYFWGAE RLPSEEVWDG AAVFPAYGVD WLWPFVTAGQ 120 ASNDDPRLNP PEEEIASLTC RRVLVAVAEK DTLRERGCRL LDRFSDYYAR TATGGEATLV 180 ESEGEDHGFH LYSPLRATSR RLMENIVRFI NQPPKPMILG VPRRPFMDVF DYGMNMKRRC 240 SDSTTTTCSM AYATSKIGGP KKNYGLFSGA VWPTNKQAYK GPAAAAAFAG TRHLIKNMW* 300 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5406 | COG5406 | 0.003 | 122 | 213 | 102 | + Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] | ||
| COG0657 | Aes | 1.0e-22 | 1 | 215 | 216 | + Esterase/lipase [Lipid metabolism] | ||
| pfam07859 | Abhydrolase_3 | 4.0e-44 | 1 | 191 | 192 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC83639.1 | 0 | 1 | 292 | 118 | 430 | putative cell death associated protein [Oryza sativa Japonica Group] |
| DDBJ | BAC83817.1 | 0 | 1 | 294 | 126 | 432 | putative PrMC3 [Oryza sativa Japonica Group] |
| GenBank | EAZ04124.1 | 0 | 1 | 212 | 134 | 333 | hypothetical protein OsI_26270 [Oryza sativa Indica Group] |
| RefSeq | NP_001059831.1 | 0 | 1 | 212 | 134 | 333 | Os07g0526600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002461382.1 | 0 | 1 | 299 | 124 | 453 | hypothetical protein SORBIDRAFT_02g001850 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ed1_F | 3e-27 | 1 | 211 | 148 | 348 | A Chain A, Peanut Peroxidase |
| PDB | 3ed1_E | 3e-27 | 1 | 211 | 148 | 348 | A Chain A, Peanut Peroxidase |
| PDB | 3ed1_D | 3e-27 | 1 | 211 | 148 | 348 | A Chain A, Peanut Peroxidase |
| PDB | 3ed1_C | 3e-27 | 1 | 211 | 148 | 348 | A Chain A, Peanut Peroxidase |
| PDB | 3ed1_B | 3e-27 | 1 | 211 | 148 | 348 | A Chain A, Peanut Peroxidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
| isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CB621565 | 209 | 4 | 212 | 0 |
| CX622978 | 222 | 115 | 300 | 0 |
| HO814441 | 222 | 1 | 211 | 0 |
| CK093234 | 219 | 2 | 212 | 0 |
| FD945520 | 214 | 2 | 212 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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