Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00057287m |
Family | GT47 |
Protein Properties | Length: 456 Molecular Weight: 50292.4 Isoelectric Point: 8.7538 |
Chromosome | Chromosome/Scaffold: 0284947 Start: 2 End: 1440 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 78 | 395 | 0 |
CAGRYIYVHDLPPRFNDDIVRGCRALRPWMDMCPYMPNCGMGRPLGAEGGAFPGRGWFATDQFMLDVILRCRMRRYACLTADPARAAAVFVPAYASLDGG RHLWNGTATRDALAADLAAWLARRPEWRAAGGRDHFLAAGRTAWDFLRKTDDDRDWGTKLLRLPAVRNMTALTAADVRAWQAKARAAERRWLFSFAGAAR PGSNGTVRAEIFQQCGASSRCGMFRCAKGSECEASPGAVMRLFESSSFCLQPRGDTATRRSTFDAVVAGCIPVFFHPDSAYTQYTAHLPEEPERWSVLIM HTDVTARNVSIEETLARI |
Full Sequence |
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Protein Sequence Length: 456 Download |
FQKDAADKSD GGRGGVLWPS RACYLVALAT TFWAVASVLF QPSPFSLPLL PSVTVRRHSP 60 HEQPPPAQPN QTAAADPCAG RYIYVHDLPP RFNDDIVRGC RALRPWMDMC PYMPNCGMGR 120 PLGAEGGAFP GRGWFATDQF MLDVILRCRM RRYACLTADP ARAAAVFVPA YASLDGGRHL 180 WNGTATRDAL AADLAAWLAR RPEWRAAGGR DHFLAAGRTA WDFLRKTDDD RDWGTKLLRL 240 PAVRNMTALT AADVRAWQAK ARAAERRWLF SFAGAARPGS NGTVRAEIFQ QCGASSRCGM 300 FRCAKGSECE ASPGAVMRLF ESSSFCLQPR GDTATRRSTF DAVVAGCIPV FFHPDSAYTQ 360 YTAHLPEEPE RWSVLIMHTD VTARNVSIEE TLARIPPETV RAMREEVIRL IPRVVYADPR 420 SARVDFKDAF DIAVEAVLDR VAKRRRGDAV DVEGC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-38 | 77 | 395 | 353 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK54285.1 | 0 | 76 | 435 | 64 | 450 | AC034258_3 hypothetical protein [Oryza sativa Japonica Group] |
RefSeq | NP_001150032.1 | 0 | 75 | 447 | 55 | 456 | xyloglucan galactosyltransferase KATAMARI 1 [Zea mays] |
Swiss-Prot | Q8H038 | 0 | 75 | 453 | 125 | 527 | KATAM_ORYSJ RecName: Full=Xyloglucan galactosyltransferase KATAMARI1 homolog |
RefSeq | XP_002464524.1 | 0 | 1 | 448 | 11 | 485 | hypothetical protein SORBIDRAFT_01g020080 [Sorghum bicolor] |
RefSeq | XP_002468517.1 | 0 | 75 | 446 | 136 | 531 | hypothetical protein SORBIDRAFT_01g047270 [Sorghum bicolor] |