Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00057415m |
Family | GH47 |
Protein Properties | Length: 643 Molecular Weight: 71884.9 Isoelectric Point: 7.8035 |
Chromosome | Chromosome/Scaffold: 029282 Start: 2514 End: 6241 |
Description | alpha-mannosidase 3 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH47 | 141 | 631 | 0 |
AFEHAWSGYRNYAMGYDELMPLSHRGTDGLGGLGATIVDSLDTAIIMGADDVVSEASKWIEENLMKRISEKGQVNLFETTIRVLGGLLSAYHLSGGDHAG SVDSGIPASYKKANPERLLEVSKDLADRLLLAFTSSPTAIPLSDVILRDRTAHAAPDGLSSTSEASTLQLEFSYLSRVSGDPKYDREAMKVLEHMRTLPK VQGLVPIYINPSSGQFSGENIRLGSRGDSYYEYLLKVWIQQVESRDSSLKYLFEMYTEAMRGVKHLLVRKTVPNKLVFVGELPFGRNGDFSPKMDHLVCF LPGTLALGATKGITKKKALESNLLTDEDIENLQLAEDLAKTCVEMYFVTSTGLAPEIAYFHIEGNPEGGPDGGNKSNKYVNDIIIKPLDRHNLLRPETVE SLFVLHRITEDPKYREWGWQIFQAFEKYTKVDSGGYSSLDDVTSLPPHRRDKMETFFLGETLKYLYLLFDESNTLPLDKYVFNTEAHPLPV |
Full Sequence |
---|
Protein Sequence Length: 643 Download |
MSGGSGPLPY SMRDVGAGGA YNNAKFRHRS RLKMFVQSLA TNSSKYRCGK FTVGKFLSLL 60 MVSGLLYLFL HKSPEGLVPD ELHGKEVNNN NVRRAPSIRT FWRKAPRLPP RLPPNEIYKN 120 NSLLQQSPSE WTSRQKKVKE AFEHAWSGYR NYAMGYDELM PLSHRGTDGL GGLGATIVDS 180 LDTAIIMGAD DVVSEASKWI EENLMKRISE KGQVNLFETT IRVLGGLLSA YHLSGGDHAG 240 SVDSGIPASY KKANPERLLE VSKDLADRLL LAFTSSPTAI PLSDVILRDR TAHAAPDGLS 300 STSEASTLQL EFSYLSRVSG DPKYDREAMK VLEHMRTLPK VQGLVPIYIN PSSGQFSGEN 360 IRLGSRGDSY YEYLLKVWIQ QVESRDSSLK YLFEMYTEAM RGVKHLLVRK TVPNKLVFVG 420 ELPFGRNGDF SPKMDHLVCF LPGTLALGAT KGITKKKALE SNLLTDEDIE NLQLAEDLAK 480 TCVEMYFVTS TGLAPEIAYF HIEGNPEGGP DGGNKSNKYV NDIIIKPLDR HNLLRPETVE 540 SLFVLHRITE DPKYREWGWQ IFQAFEKYTK VDSGGYSSLD DVTSLPPHRR DKMETFFLGE 600 TLKYLYLLFD ESNTLPLDKY VFNTEAHPLP VMRSMEQASH SV* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 2.0e-169 | 133 | 631 | 502 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 0 | 141 | 631 | 497 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAT01383.1 | 0 | 27 | 642 | 86 | 701 | putative alpha-mannosidase [Oryza sativa Japonica Group] |
GenBank | EAY96947.1 | 0 | 27 | 642 | 86 | 701 | hypothetical protein OsI_18866 [Oryza sativa Indica Group] |
RefSeq | NP_001054909.1 | 0 | 7 | 642 | 10 | 645 | Os05g0209100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148788.1 | 0 | 1 | 642 | 1 | 642 | LOC100282405 [Zea mays] |
RefSeq | XP_002440782.1 | 0 | 1 | 642 | 1 | 642 | hypothetical protein SORBIDRAFT_09g006500 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fmi_A | 0 | 126 | 631 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 126 | 631 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 126 | 631 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 0 | 104 | 631 | 66 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1dl2_A | 0 | 135 | 632 | 6 | 495 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
GO845862 | 338 | 275 | 612 | 0 |
GO864530 | 314 | 189 | 502 | 0 |
GO864806 | 297 | 251 | 547 | 0 |
JG968843 | 266 | 316 | 581 | 0 |
JG858860 | 299 | 261 | 559 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|