Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00057654m |
Family | GH3 |
Protein Properties | Length: 676 Molecular Weight: 72829.7 Isoelectric Point: 7.5869 |
Chromosome | Chromosome/Scaffold: 028666 Start: 4235 End: 6970 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 155 | 389 | 0 |
STRLGIPMIYGIDAVHGHNNVYGATIFPHNVALGATRDPDLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTELIPGLQG DVPQNFTSGMPYVAGQNKVAACAKHFVGDGGTHDGINENNTIIDRPGLMSIHMPAYLDSLRKGVSTVMISYSSWNGIKMHANHNLITNFLKGRLNFKGFT ISDWEGIDRITSPAGANYSYSVQAGILAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 676 Download |
MGGGEIAGRI RSGVLEPLED RFTEILIWSL QCYDAQVRKR LVPLLRRHRM ALLTAPAVAA 60 LLLLFWSAAY GGAQLPYKDP SLPVEARVKD LLGRMTLAEK IGQMTQIERK VASPQVLKDN 120 FIGSLLSGGG SVPRLQATAA DWMSMISDYQ KACLSTRLGI PMIYGIDAVH GHNNVYGATI 180 FPHNVALGAT RDPDLVKRIG AATALEVRAT GIQYAFAPCI AVCRDPRWGR CYESYSEDHK 240 IVQAMTELIP GLQGDVPQNF TSGMPYVAGQ NKVAACAKHF VGDGGTHDGI NENNTIIDRP 300 GLMSIHMPAY LDSLRKGVST VMISYSSWNG IKMHANHNLI TNFLKGRLNF KGFTISDWEG 360 IDRITSPAGA NYSYSVQAGI LAGIDMIMVP NNYQSFISIL TGHVNSGVIP MSRIDDAVTR 420 ILRVKFTMGL FENPMPDATL ADQLGKKEHR DLAREAVRKS LVLLKNGKPG DAPLLPLPKK 480 AAKILVAGSH ADNLGYQCGG WTIEWQGDTG RITVGTTILD SVKAAVDPST AVVFAENPDA 540 DFVKNGGFSY AIVAVGEHPY TETQGDSMNL TIPDPGPSTI QTVCGAVRCA TLLVTGRPVV 600 IQPFLGATDA LVAAWLPGSE GQGVTDVLFG DYGFTGKLPR TWFKSVDQLP MNVGDAHYDP 660 LFPLGFGLTT NGNAY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 5.0e-36 | 76 | 660 | 629 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-37 | 461 | 669 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 4.0e-72 | 73 | 669 | 684 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 6.0e-83 | 95 | 528 | 447 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 8.0e-86 | 96 | 424 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD23382.1 | 0 | 77 | 671 | 30 | 625 | AF102868_1 beta-D-glucan exohydrolase isoenzyme ExoI [Hordeum vulgare subsp. vulgare] |
GenBank | AAL58976.1 | 0 | 9 | 675 | 12 | 677 | AC091811_25 putative exohydrolase [Oryza sativa Japonica Group] |
GenBank | ADC55526.1 | 0 | 77 | 671 | 7 | 602 | beta-D-glucan glucohydrolase precursor [synthetic construct] |
RefSeq | NP_001051277.1 | 0 | 77 | 675 | 28 | 626 | Os03g0749500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001104913.1 | 0 | 72 | 675 | 29 | 632 | LOC541703 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 77 | 671 | 5 | 600 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1x38_A | 0 | 77 | 671 | 5 | 600 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1lq2_A | 0 | 77 | 671 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 77 | 671 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 77 | 671 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |