| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00057923m |
| Family | AA2 |
| Protein Properties | Length: 311 Molecular Weight: 33807.4 Isoelectric Point: 7.2533 |
| Chromosome | Chromosome/Scaffold: 019707 Start: 5068 End: 9347 |
| Description | stromal ascorbate peroxidase |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA2 | 57 | 299 | 0 |
| TTFCHPILVRLGWHDAGTYDKNIAEWPKCGGANGSLRFEIELKHGANAGLVNALKLIQPIKDKFSGVTYADLFQLASATAIEEAGGPKIPMIYGRVDVTA PEQCPPEGRLPAAGPPSPAEHLREVFYRMGLNDKEIVALSGAHTLGRARPERSGWGKPETKYTKDGPGAPGGQSWTSQWLKFDNSYFKDVKERQDQDLLV LPTDAVLFEDSSFKVYAEKYAEDQDAFFKDYAEAHAKLSNLGA | |||
| Full Sequence |
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| Protein Sequence Length: 311 Download |
| MAVHHLLRRG VSGGSPLRGL LLASQEIGRR PLSLAVSGDA AAELRGARED VKQLIKTTFC 60 HPILVRLGWH DAGTYDKNIA EWPKCGGANG SLRFEIELKH GANAGLVNAL KLIQPIKDKF 120 SGVTYADLFQ LASATAIEEA GGPKIPMIYG RVDVTAPEQC PPEGRLPAAG PPSPAEHLRE 180 VFYRMGLNDK EIVALSGAHT LGRARPERSG WGKPETKYTK DGPGAPGGQS WTSQWLKFDN 240 SYFKDVKERQ DQDLLVLPTD AVLFEDSSFK VYAEKYAEDQ DAFFKDYAEA HAKLSNLGAK 300 FDPPKGISLE * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 1.0e-49 | 47 | 279 | 241 | + Peroxidase. | ||
| PLN02364 | PLN02364 | 2.0e-66 | 36 | 298 | 264 | + L-ascorbate peroxidase 1 | ||
| PLN02879 | PLN02879 | 8.0e-68 | 48 | 298 | 251 | + L-ascorbate peroxidase | ||
| PLN02608 | PLN02608 | 7.0e-98 | 36 | 304 | 271 | + L-ascorbate peroxidase | ||
| cd00691 | ascorbate_peroxidase | 6.0e-145 | 39 | 302 | 268 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27920.1 | 0 | 1 | 310 | 1 | 313 | unknown [Zea mays] |
| GenBank | EEC68950.1 | 0 | 3 | 310 | 4 | 319 | hypothetical protein OsI_37673 [Oryza sativa Indica Group] |
| GenBank | EEE52862.1 | 0 | 3 | 310 | 4 | 299 | hypothetical protein OsJ_35415 [Oryza sativa Japonica Group] |
| RefSeq | NP_001066305.1 | 0 | 3 | 310 | 4 | 309 | Os12g0178100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002441920.1 | 0 | 1 | 310 | 1 | 313 | hypothetical protein SORBIDRAFT_08g004880 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1iyn_A | 0 | 41 | 310 | 5 | 274 | A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability |
| PDB | 1apx_D | 0 | 36 | 298 | 7 | 245 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1apx_C | 0 | 36 | 298 | 7 | 245 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1apx_B | 0 | 36 | 298 | 7 | 245 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1apx_A | 0 | 36 | 298 | 7 | 245 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| L-ascorbate degradation III | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
| L-ascorbate degradation V | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DR736540 | 302 | 1 | 299 | 0 |
| EB813266 | 289 | 1 | 286 | 0 |
| DR964321 | 288 | 1 | 285 | 0 |
| DR963660 | 286 | 1 | 283 | 0 |
| DR964321 | 19 | 283 | 301 | 0.77 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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