y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00058175m |
Family | GT34 |
Protein Properties | Length: 342 Molecular Weight: 38804.2 Isoelectric Point: 8.9899 |
Chromosome | Chromosome/Scaffold: 019798 Start: 8264 End: 9289 |
Description | xylosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT34 | 125 | 338 | 0 |
PRVLVVTGSSPRRCGNADGDHLLLRAFKNKVDYCRAHGLDIFYSNAVLDAELSGFWTKLPILRALMLAHPETELLWWADSDAVFTDMLFEPPWGRYTAHN LVLPGWDDKVYAARSWLGINAGSFIIRNCQWSLDLLDAWARMGPRGPVRDQYGKVLGAALSDRPPYEADDQSALVYLLVTQRGRWGARTFLEGSYSLHGY WVDIVDRYEEMRRR |
Full Sequence |
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Protein Sequence Length: 342 Download |
MSEEADRRPR QQRLLPVPFI PVLLFLVAPF ALFLFTSPDL QLPRIRIEYG RGDAPSSAPS 60 AMRTSPSPVP RADDSNEETR FPPPRQLTDP PYSLGTTAVS GYDARRAKWL RDNPRFPAFV 120 APGRPRVLVV TGSSPRRCGN ADGDHLLLRA FKNKVDYCRA HGLDIFYSNA VLDAELSGFW 180 TKLPILRALM LAHPETELLW WADSDAVFTD MLFEPPWGRY TAHNLVLPGW DDKVYAARSW 240 LGINAGSFII RNCQWSLDLL DAWARMGPRG PVRDQYGKVL GAALSDRPPY EADDQSALVY 300 LLVTQRGRWG ARTFLEGSYS LHGYWVDIVD RYEEMRRRSR TP 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05637 | Glyco_transf_34 | 1.0e-53 | 125 | 316 | 216 | + galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34. | ||
PLN03181 | PLN03181 | 5.0e-111 | 56 | 338 | 299 | + glycosyltransferase; Provisional | ||
PLN03182 | PLN03182 | 1.0e-167 | 45 | 340 | 306 | + xyloglucan 6-xylosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0016021 | integral to membrane |
GO:0016758 | transferase activity, transferring hexosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF95527.1 | 0 | 75 | 340 | 91 | 356 | Glycosyltransferase 3, putative [Oryza sativa (japonica cultivar-group)] |
GenBank | EAY89696.1 | 0 | 75 | 340 | 91 | 356 | hypothetical protein OsI_11232 [Oryza sativa Indica Group] |
RefSeq | NP_001049886.1 | 0 | 33 | 342 | 45 | 381 | Os03g0305800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002465378.1 | 0 | 41 | 337 | 44 | 345 | hypothetical protein SORBIDRAFT_01g037530 [Sorghum bicolor] |
RefSeq | XP_002465379.1 | 0 | 5 | 341 | 9 | 349 | hypothetical protein SORBIDRAFT_01g037540 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xyloglucan biosynthesis | RXN-12415 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
xyloglucan biosynthesis | RXN-9461 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |