Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00058241m |
Family | GT34 |
Protein Properties | Length: 329 Molecular Weight: 37126.4 Isoelectric Point: 8.2806 |
Chromosome | Chromosome/Scaffold: 019839 Start: 8058 End: 9044 |
Description | xylosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT34 | 19 | 257 | 0 |
PRVLVVTGSSPRRCSAPDGGHLLLRAFKNKVDYCRVHGFDIFYSTAVLDAELTGFWTKLPLLRALMLAHPETEFLWWMDSDLMLTDMLFEPPWDRYGSHN LVIPGWDAKVYSAKSRLGVNAGSFIIRNCRWSLDLLDAWARMGPRGPVREMYGKLIAGTLSDRGPYEACDHSTLMYLLVTERGRWGGKTFLESSYSLHGF WAGIVDRYEEMRRDPAPGPGGERWPLVTHFVGCKPCGGV |
Full Sequence |
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Protein Sequence Length: 329 Download |
AQWLRDNPRF PAFVAPGRPR VLVVTGSSPR RCSAPDGGHL LLRAFKNKVD YCRVHGFDIF 60 YSTAVLDAEL TGFWTKLPLL RALMLAHPET EFLWWMDSDL MLTDMLFEPP WDRYGSHNLV 120 IPGWDAKVYS AKSRLGVNAG SFIIRNCRWS LDLLDAWARM GPRGPVREMY GKLIAGTLSD 180 RGPYEACDHS TLMYLLVTER GRWGGKTFLE SSYSLHGFWA GIVDRYEEMR RDPAPGPGGE 240 RWPLVTHFVG CKPCGGVDSS YDTARCRRGM ERALNFADDQ ILNLYGFEHE SLNSTAVRRV 300 RNDTGGPLDA DDVVLRRLLH PTFRAANL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05637 | Glyco_transf_34 | 4.0e-58 | 19 | 256 | 262 | + galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34. | ||
PLN03181 | PLN03181 | 8.0e-119 | 1 | 298 | 334 | + glycosyltransferase; Provisional | ||
PLN03182 | PLN03182 | 0 | 1 | 307 | 307 | + xyloglucan 6-xylosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0016021 | integral to membrane |
GO:0016758 | transferase activity, transferring hexosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF95527.1 | 0 | 1 | 326 | 122 | 445 | Glycosyltransferase 3, putative [Oryza sativa (japonica cultivar-group)] |
GenBank | EAY89696.1 | 0 | 1 | 326 | 122 | 445 | hypothetical protein OsI_11232 [Oryza sativa Indica Group] |
RefSeq | NP_001049886.1 | 0 | 1 | 325 | 146 | 471 | Os03g0305800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002465378.1 | 0 | 1 | 326 | 115 | 443 | hypothetical protein SORBIDRAFT_01g037530 [Sorghum bicolor] |
RefSeq | XP_002465379.1 | 0 | 1 | 328 | 115 | 446 | hypothetical protein SORBIDRAFT_01g037540 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xyloglucan biosynthesis | RXN-12415 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
xyloglucan biosynthesis | RXN-9461 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX269292 | 299 | 1 | 299 | 0 |
JG212913 | 294 | 1 | 294 | 0 |
DV979949 | 290 | 2 | 291 | 0 |
DR921866 | 273 | 1 | 273 | 0 |
EV241557 | 288 | 20 | 307 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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