Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00058358m |
Family | GH27 |
Protein Properties | Length: 168 Molecular Weight: 18031.1 Isoelectric Point: 4.6348 |
Chromosome | Chromosome/Scaffold: 0200890 Start: 14 End: 979 |
Description | alpha-galactosidase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 4 | 101 | 1.2e-24 |
IADANDKWASYAGPDPDMLEVGNGGMTTEEYRSHFSIWALAKAPLLIGCDIRSMSNDTKEILSNQNVIAVNQDKLGVQGHKVQQDGDEEVWAGPLSGG |
Full Sequence |
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Protein Sequence Length: 168 Download |
MTAIADANDK WASYAGPDPD MLEVGNGGMT TEEYRSHFSI WALAKAPLLI GCDIRSMSND 60 TKEILSNQNV IAVNQDKLGV QGHKVQQDGD EEVWAGPLSG GRVAVVRWNR GSAEASITAN 120 WSSIGLNAST VVDAHNLWTN EVTSSVQGEL KETVDTHACK MYVLTPK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02899 | PLN02899 | 3.0e-7 | 17 | 74 | 71 | + alpha-galactosidase | ||
PLN03231 | PLN03231 | 9.0e-8 | 17 | 79 | 76 | + putative alpha-galactosidase; Provisional | ||
PLN02692 | PLN02692 | 8.0e-66 | 1 | 166 | 171 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 6.0e-74 | 1 | 166 | 174 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 1.0e-94 | 1 | 167 | 171 | + alpha-galactosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI35340.1 | 0 | 1 | 166 | 236 | 405 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271010.1 | 0 | 1 | 166 | 198 | 367 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002459948.1 | 0 | 1 | 167 | 137 | 307 | hypothetical protein SORBIDRAFT_02g018580 [Sorghum bicolor] |
RefSeq | XP_002459949.1 | 0 | 1 | 167 | 132 | 302 | hypothetical protein SORBIDRAFT_02g018590 [Sorghum bicolor] |
RefSeq | XP_002459951.1 | 0 | 1 | 167 | 161 | 331 | hypothetical protein SORBIDRAFT_02g018600 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 1 | 166 | 193 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 2e-27 | 18 | 161 | 238 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 1e-22 | 8 | 167 | 220 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 1e-22 | 8 | 167 | 220 | 387 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3a23_B | 2e-22 | 18 | 141 | 236 | 360 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CJ552795 | 172 | 1 | 168 | 0 |
CA267834 | 153 | 16 | 168 | 0 |
EX583595 | 172 | 1 | 168 | 0 |
EX590784 | 172 | 1 | 168 | 0 |
EX578544 | 167 | 6 | 168 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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