Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00058463m |
Family | AA1 |
Protein Properties | Length: 452 Molecular Weight: 49555.2 Isoelectric Point: 5.8507 |
Chromosome | Chromosome/Scaffold: 0194369 Start: 4 End: 1823 |
Description | laccase 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 1 | 437 | 0 |
GREGTLWWHAHSSWLRATVYGALIIRPRENKAYPFGKPSREVPVILGEWWNANPIDVIREAQRTGGGPNVSDAFTINGQPGDFYNCSQEETTAIPVKPGE TALLRFINAALNHELFVSIAQHKMTVVAADASYTKPFTTSVLMIAPGQTTDVLVTMDQAPTRYYVAARAYVSGQNVAFDNTTTTAVIEYDCGCASDFGPK IQPAFPALPAFNDTAAAAAAFAAGIKSPGKVKVHEDVDEYLFFTVGLGLFNCEPGQLCAGPNNNTRFTASMNNVSFVFPQHDSLLHAHYYKIPGVFTTDF PAYPPVQFDYTAKNVSRALWQPVPGTKLYPLRFGSVVQLVLQDTSIVTPENHPIHIHGYDFFILAEGCGNFDPKKDVEKFNYVDPPQRNTVAVPVNGWAV IQFVADNPGVWLMHCHLDVHITWGLAMAFLVEDGYGK |
Full Sequence |
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Protein Sequence Length: 452 Download |
GREGTLWWHA HSSWLRATVY GALIIRPREN KAYPFGKPSR EVPVILGEWW NANPIDVIRE 60 AQRTGGGPNV SDAFTINGQP GDFYNCSQEE TTAIPVKPGE TALLRFINAA LNHELFVSIA 120 QHKMTVVAAD ASYTKPFTTS VLMIAPGQTT DVLVTMDQAP TRYYVAARAY VSGQNVAFDN 180 TTTTAVIEYD CGCASDFGPK IQPAFPALPA FNDTAAAAAA FAAGIKSPGK VKVHEDVDEY 240 LFFTVGLGLF NCEPGQLCAG PNNNTRFTAS MNNVSFVFPQ HDSLLHAHYY KIPGVFTTDF 300 PAYPPVQFDY TAKNVSRALW QPVPGTKLYP LRFGSVVQLV LQDTSIVTPE NHPIHIHGYD 360 FFILAEGCGN FDPKKDVEKF NYVDPPQRNT VAVPVNGWAV IQFVADNPGV WLMHCHLDVH 420 ITWGLAMAFL VEDGYGKLQS LEPPPVDLPM C* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07731 | Cu-oxidase_2 | 2.0e-40 | 299 | 434 | 140 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
pfam00394 | Cu-oxidase | 5.0e-43 | 40 | 192 | 157 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
PLN02604 | PLN02604 | 2.0e-44 | 2 | 441 | 466 | + oxidoreductase | ||
TIGR03388 | ascorbase | 5.0e-54 | 2 | 441 | 470 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 1 | 451 | 457 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27868.1 | 0 | 1 | 451 | 66 | 516 | unknown [Zea mays] |
GenBank | ACN28316.1 | 0 | 1 | 451 | 122 | 571 | unknown [Zea mays] |
RefSeq | NP_001044679.1 | 0 | 1 | 451 | 119 | 567 | Os01g0827300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148479.1 | 0 | 1 | 451 | 122 | 572 | L-ascorbate oxidase [Zea mays] |
RefSeq | XP_002456566.1 | 0 | 1 | 451 | 120 | 568 | hypothetical protein SORBIDRAFT_03g038550 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 6e-38 | 4 | 429 | 99 | 521 | A Chain A, Crystal Structure Of Phosphonoacetate Hydrolase Complexed With Phosphonoformate |
PDB | 1asq_A | 6e-38 | 4 | 429 | 99 | 521 | A Chain A, Crystal Structure Of Phosphonoacetate Hydrolase Complexed With Phosphonoformate |
PDB | 1asp_B | 6e-38 | 4 | 429 | 99 | 521 | A Chain A, Crystal Structure Of Phosphonoacetate Hydrolase Complexed With Phosphonoformate |
PDB | 1asp_A | 6e-38 | 4 | 429 | 99 | 521 | A Chain A, Crystal Structure Of Phosphonoacetate Hydrolase Complexed With Phosphonoformate |
PDB | 1aso_B | 6e-38 | 4 | 429 | 99 | 521 | A Chain A, Crystal Structure Of Phosphonoacetate Hydrolase Complexed With Phosphonoformate |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL873478 | 259 | 4 | 262 | 0 |
FL950722 | 270 | 51 | 320 | 0 |
FL925781 | 222 | 231 | 452 | 0 |
FE641660 | 235 | 93 | 327 | 0 |
DR955849 | 229 | 224 | 452 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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