| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00058661m |
| Family | AA1 |
| Protein Properties | Length: 504 Molecular Weight: 55327.6 Isoelectric Point: 7.7685 |
| Chromosome | Chromosome/Scaffold: 019768 Start: 5862 End: 9338 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 257 | 479 | 4.1002e-42 |
| SPRRPPPTAPPTGPAWNDTMYRFRQSVATVAHPAHVEPPPPRADRTILLLNTQNRIDGRTKWAINNVSFTLPHTPYLVAMKSGLLGAFDQRPPPETYEHR GYDVYAVQENPNATTSDGLYRLRFGSVVDVVLQNANMLAANNSETHPWHLHGHDFWVLGYGIGRFDPAVHPSTYNLRDPILKNTVAVHPYGWTALRFKSD NPGVWAFHCHIEAHFFMGMGIVF | |||
| AA1 | 1 | 275 | 0 |
| VVRVKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPVLPGDVFTYAFVVDRPGTYMYHAHYGMQRSAGLNGLIVVAAAPGGPDAEPFAYDGEHEVLLN DWWHKSTYEQAAGLASAPIVWVGEPQSLLINGRGRFANCSAMAAGACNAAHPECAPQVFAVVPGKTYRFRIASVTSLSALNFEIEGHQMTVVEADGHYVK PFVVKNLNIYSGETYSVLIKADQDPNRNYWLASNVVSRKPGTATGTAVLSYYGGRSSPRRPPPTAPPTGPAWNDT | |||
| Full Sequence |
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| Protein Sequence Length: 504 Download |
| VVRVKNSLLT ENVAIHWHGI RQIGTPWADG TEGVTQCPVL PGDVFTYAFV VDRPGTYMYH 60 AHYGMQRSAG LNGLIVVAAA PGGPDAEPFA YDGEHEVLLN DWWHKSTYEQ AAGLASAPIV 120 WVGEPQSLLI NGRGRFANCS AMAAGACNAA HPECAPQVFA VVPGKTYRFR IASVTSLSAL 180 NFEIEGHQMT VVEADGHYVK PFVVKNLNIY SGETYSVLIK ADQDPNRNYW LASNVVSRKP 240 GTATGTAVLS YYGGRSSPRR PPPTAPPTGP AWNDTMYRFR QSVATVAHPA HVEPPPPRAD 300 RTILLLNTQN RIDGRTKWAI NNVSFTLPHT PYLVAMKSGL LGAFDQRPPP ETYEHRGYDV 360 YAVQENPNAT TSDGLYRLRF GSVVDVVLQN ANMLAANNSE THPWHLHGHD FWVLGYGIGR 420 FDPAVHPSTY NLRDPILKNT VAVHPYGWTA LRFKSDNPGV WAFHCHIEAH FFMGMGIVFE 480 KGVERVAELP RDIMGCGKTK GGH* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 1.0e-73 | 2 | 482 | 510 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| TIGR03389 | laccase | 2.0e-92 | 1 | 496 | 527 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| TIGR03388 | ascorbase | 0 | 1 | 499 | 505 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02604 | PLN02604 | 0 | 1 | 501 | 505 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 0 | 1 | 500 | 507 | + L-ascorbate oxidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27982.1 | 0 | 1 | 503 | 68 | 569 | unknown [Zea mays] |
| RefSeq | NP_001063005.1 | 0 | 1 | 503 | 68 | 577 | Os09g0365900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002462284.1 | 0 | 1 | 503 | 68 | 570 | hypothetical protein SORBIDRAFT_02g023140 [Sorghum bicolor] |
| RefSeq | XP_002462285.1 | 0 | 1 | 503 | 67 | 571 | hypothetical protein SORBIDRAFT_02g023150 [Sorghum bicolor] |
| RefSeq | XP_002462286.1 | 0 | 2 | 503 | 78 | 579 | hypothetical protein SORBIDRAFT_02g023160 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 1 | 499 | 45 | 541 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1asq_A | 0 | 1 | 499 | 45 | 541 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1asp_B | 0 | 1 | 499 | 45 | 541 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1asp_A | 0 | 1 | 499 | 45 | 541 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1aso_B | 0 | 1 | 499 | 45 | 541 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV705515 | 315 | 172 | 486 | 0 |
| CX611873 | 198 | 300 | 497 | 0 |
| CX606134 | 191 | 307 | 497 | 0 |
| FL861689 | 238 | 108 | 345 | 0 |
| FL861689 | 22 | 86 | 107 | 0.00003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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