Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00058680m |
Family | GH17 |
Protein Properties | Length: 342 Molecular Weight: 36799.8 Isoelectric Point: 5.7027 |
Chromosome | Chromosome/Scaffold: 0198669 Start: 3 End: 1150 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 32 | 342 | 0 |
VGVSYGRVASDLPPDQASVVDLLRRNGITKVRIYDADPGVLKSLANTGIRVMVMLPNDNLAQAARDPSYAPWWVRSNVKAYYPATLIDGVAVGNEVFDAR PDLNSDLVRAMTNVQSALAQQGLDGAIKVSTPIALDALEVSWPPSKGRFKGEIAERVMKPMLDFLQRTGSYLSVNLFPCLTYMRQPDMNRDFALGNSKAP GYRDDATGLEYHSLLDAQLDATYFAMEKLGFPQLRVRHTEHGCASGGGLRPGHGGRRLEDGDDGGGAAPSVANAQAYINNLMDRVASGRTGTPHRPDADM DVYIFALFNEN |
Full Sequence |
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Protein Sequence Length: 342 Download |
MVLARFLAVV LAGAAALPLL LFSCAAEAGG EVGVSYGRVA SDLPPDQASV VDLLRRNGIT 60 KVRIYDADPG VLKSLANTGI RVMVMLPNDN LAQAARDPSY APWWVRSNVK AYYPATLIDG 120 VAVGNEVFDA RPDLNSDLVR AMTNVQSALA QQGLDGAIKV STPIALDALE VSWPPSKGRF 180 KGEIAERVMK PMLDFLQRTG SYLSVNLFPC LTYMRQPDMN RDFALGNSKA PGYRDDATGL 240 EYHSLLDAQL DATYFAMEKL GFPQLRVRHT EHGCASGGGL RPGHGGRRLE DGDDGGGAAP 300 SVANAQAYIN NLMDRVASGR TGTPHRPDAD MDVYIFALFN EN |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 3.0e-75 | 32 | 342 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD10386.1 | 0 | 14 | 342 | 13 | 324 | beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
RefSeq | NP_001151472.1 | 0 | 1 | 342 | 1 | 355 | hydrolase, hydrolyzing O-glycosyl compounds [Zea mays] |
RefSeq | XP_002462967.1 | 0 | 7 | 342 | 6 | 360 | hypothetical protein SORBIDRAFT_02g035480 [Sorghum bicolor] |
RefSeq | XP_002462968.1 | 0 | 31 | 342 | 28 | 351 | hypothetical protein SORBIDRAFT_02g035490 [Sorghum bicolor] |
RefSeq | XP_002462970.1 | 0 | 30 | 342 | 23 | 359 | hypothetical protein SORBIDRAFT_02g035520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 32 | 342 | 1 | 287 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 32 | 342 | 1 | 281 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 32 | 342 | 1 | 281 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 32 | 342 | 1 | 281 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1ghs_B | 6.02558e-44 | 32 | 342 | 1 | 280 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |