Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00058859m |
Family | GH17 |
Protein Properties | Length: 305 Molecular Weight: 31030 Isoelectric Point: 4.7536 |
Chromosome | Chromosome/Scaffold: 020160 Start: 4743 End: 5729 |
Description | beta-1,3-glucanase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 4 | 76 | 7.9e-24 |
IGVNYGMIADNLPSPDKVIALCRARNITDVRLFHPDTAVLAALRGSGLGVVLGTLNEDLARLASDASFAASWV | |||
GH17 | 81 | 297 | 0 |
LAALVLPAIRNLESALRGAGLGGVAVTTAVSTAVLGSSYPPSQGAFSEAALPWVGPIASFLASRSTPLLVNVYPYFAYAADPSSVLLDYALLRSASAASV TDGGVAYTNMFDAIVDAVHAALGRVAASGGGAVDVVVSETGWPSGGAGAGASVENAAAYVNNVVRHVGSGRGTPRRPGKAVEAFVFAMFNENQKPEGVER HFGLFEPDMTEVYHVDF |
Full Sequence |
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Protein Sequence Length: 305 Download |
VEGIGVNYGM IADNLPSPDK VIALCRARNI TDVRLFHPDT AVLAALRGSG LGVVLGTLNE 60 DLARLASDAS FAASWVIPGD LAALVLPAIR NLESALRGAG LGGVAVTTAV STAVLGSSYP 120 PSQGAFSEAA LPWVGPIASF LASRSTPLLV NVYPYFAYAA DPSSVLLDYA LLRSASAASV 180 TDGGVAYTNM FDAIVDAVHA ALGRVAASGG GAVDVVVSET GWPSGGAGAG ASVENAAAYV 240 NNVVRHVGSG RGTPRRPGKA VEAFVFAMFN ENQKPEGVER HFGLFEPDMT EVYHVDFTAA 300 GSPA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 1.0e-89 | 4 | 297 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD10384.1 | 0 | 1 | 299 | 23 | 336 | beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
GenBank | EAY98549.1 | 0 | 4 | 300 | 39 | 355 | hypothetical protein OsI_20461 [Oryza sativa Indica Group] |
RefSeq | NP_001044540.1 | 0 | 1 | 299 | 23 | 337 | Os01g0801500 [Oryza sativa (japonica cultivar-group)] |
Swiss-Prot | Q02439 | 0 | 1 | 302 | 4 | 321 | E13F_HORVU RecName: Full=Putative glucan endo-1,3-beta-glucosidase GVI; AltName: Full=(1- |
RefSeq | XP_002458641.1 | 0 | 1 | 302 | 24 | 347 | hypothetical protein SORBIDRAFT_03g037270 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 4 | 297 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 4 | 298 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 4 | 298 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 4 | 298 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 4 | 298 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL777976 | 207 | 1 | 183 | 0 |
CT850108 | 218 | 4 | 199 | 0 |
CB684610 | 182 | 119 | 300 | 0 |
CI189716 | 165 | 136 | 300 | 0 |
EE171961 | 193 | 119 | 304 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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