CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00058950m
FamilyGH43
Protein PropertiesLength: 284 Molecular Weight: 32261.2 Isoelectric Point: 5.5666
ChromosomeChromosome/Scaffold: 0192913 Start: 673 End: 1877
Descriptionglycosyl hydrolase family protein 43
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH4362021.3e-35
  GVSCYSSKDLWTWKNEGVVLRGEEKNVTHDLHKSNVLERPKVIYNDRTGKYVMWMHIDDANYTKASVGVAVSDSPTGPFTYLYSKRPHDCESRDMTIFKD
  DDGKAYLIYSSEDNSELHIGPLTDDYLDVTDDMRRFLIAQHREAPALFKHEGTYYMVTSGCTGWAPNTALAHAATSVMGPWETLGNPCVGGNEVFRS
Full Sequence
Protein Sequence     Length: 284     Download
QVDIVGVSCY SSKDLWTWKN EGVVLRGEEK NVTHDLHKSN VLERPKVIYN DRTGKYVMWM    60
HIDDANYTKA SVGVAVSDSP TGPFTYLYSK RPHDCESRDM TIFKDDDGKA YLIYSSEDNS    120
ELHIGPLTDD YLDVTDDMRR FLIAQHREAP ALFKHEGTYY MVTSGCTGWA PNTALAHAAT    180
SVMGPWETLG NPCVGGNEVF RSTTFFSQST FVLPVPGLPG SFIFMADRWN PSDLRDSRYV    240
WLPLTIGGVP DEAADYSFMF PLWSRVSIYW HKRWRLPEGW RDS* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd09004GH43_bXyl3.0e-238191195+
cd08990GH43_AXH_like1.0e-239187193+
cd08978GH_F3.0e-436246252+
cd08985GH43_61.0e-1166246242+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG45031.101283186467glycosyl hydrolase, family 43 protein [Zea mays]
GenBankEEE53089.101283482764hypothetical protein OsJ_35850 [Oryza sativa Japonica Group]
RefSeqNP_001066630.101283184466Os12g0406100 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001151925.101283186467glycosyl hydrolase, family 43 protein [Zea mays]
RefSeqXP_002468324.101283185467hypothetical protein SORBIDRAFT_01g043810 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vt2_F0426883346A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants
PDB3vt2_E0426883346A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants
PDB3vt2_D0426883346A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants
PDB3vt2_C0426883346A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants
PDB3vt2_B0426883346A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
JG86468427312730
GO80175328412840
JG877590258272840
JG790147249332810
CJ960146243422840
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_060_00007.3Aquca_060_00007.1Aquca_060_00007.2
Arabidopsis lyrata906305332819
Arabidopsis thalianaAT5G67540.2AT5G67540.1AT3G49880.1
Brachypodium distachyonBradi2g50980.2Bradi1g71160.1Bradi2g50980.1
Brassica rapaBra024441Bra029980Bra036036
Capsella rubellaCarubv10027885mCarubv10019437m
Citrus clementinaCiclev10025553mCiclev10025552mCiclev10025561m
Citrus sinensisorange1.1g011114morange1.1g012300morange1.1g012453m
Cucumis sativusCucsa.366970.1Cucsa.366990.1
Eucalyptus grandisEucgr.I00703.2Eucgr.I00703.1Eucgr.H02307.1
Fragaria vescamrna05759.1-v1.0-hybrid
Glycine maxGlyma05g22470.3Glyma17g17390.3Glyma17g17390.2Glyma17g17390.1Glyma05g22470.6
Glyma05g22470.5Glyma05g22470.4Glyma05g22470.2Glyma01g40190.1Glyma11g05100.1
Gossypium raimondiiGorai.011G214500.1Gorai.008G083400.1Gorai.003G030500.1Gorai.003G030500.2
Linum usitatissimumLus10011543Lus10019280
Malus domesticaMDP0000248963MDP0000503275MDP0000406084
Manihot esculentacassava4.1_032973mcassava4.1_007150mcassava4.1_007066m
Medicago truncatulaMedtr5g015460.1Medtr4g097110.1
Mimulus guttatusmgv1a018781mmgv1a005746m
Oryza sativaLOC_Os12g21789.1LOC_Os12g21789.2LOC_Os01g65720.1
Panicum virgatumPavirv00010178mPavirv00067870mPavirv00044467m
Physcomitrella patensPp1s410_9V6.1Pp1s16_243V6.1
Phaseolus vulgarisPhvul.003G234900.1Phvul.002G010600.1
Picea abiesMA_181765g0010
Populus trichocarpaPotri.005G148800.1Potri.005G148800.2
Prunus persicappa005306m
Ricinus communis48021.m00001434138.m00001529661.m000924
Setaria italicaSi001388mSi035531m
Selaginella moellendorffii44066110234
Sorghum bicolorSb03g041630.1Sb01g043810.1
Thellungiella halophilaThhalv10004148mThhalv10010347m
Vitis viniferaGSVIVT01000105001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny