y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00059288m |
Family | GH1 |
Protein Properties | Length: 390 Molecular Weight: 44620.5 Isoelectric Point: 9.1497 |
Chromosome | Chromosome/Scaffold: 0148505 Start: 176 End: 2859 |
Description | beta glucosidase 17 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 6 | 388 | 0 |
GGINREGVNYYNNLINELLSKGMQPYVTLFHWDTPQALEDKYEGFLSPNITIDYKDYAEVCFKEFGDRVKRWITFNEPWTFSSSGYAVGFAAPGRCSPWD FGRCSAGDSGREPYIVAHHQLLAHAETVRLYREKYQRVQGGTIGITLISHWFLPYNRSITNDAAARRAIEFMFGWFMDPLIKGNYPASMRGLVGNRLPKI TEEQSKLIKGSFDFIGLNYYTTNYASPLPPSNGLNKTYSTDSQANLTGVRNGVPIGPQGGSSWLYIYPQGFRDLLLYIKKYYGNPPIYITENGVDEKNNK SLPLKEALKDDTRIYYYRTHLLSMLSAIKEGANVKGYFAWSLLDNFEWANGYTVRFGIYFVDYNDGYKRYPKKSAYWFKKFLE |
Full Sequence |
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Protein Sequence Length: 390 Download |
DGSLSGGINR EGVNYYNNLI NELLSKGMQP YVTLFHWDTP QALEDKYEGF LSPNITIDYK 60 DYAEVCFKEF GDRVKRWITF NEPWTFSSSG YAVGFAAPGR CSPWDFGRCS AGDSGREPYI 120 VAHHQLLAHA ETVRLYREKY QRVQGGTIGI TLISHWFLPY NRSITNDAAA RRAIEFMFGW 180 FMDPLIKGNY PASMRGLVGN RLPKITEEQS KLIKGSFDFI GLNYYTTNYA SPLPPSNGLN 240 KTYSTDSQAN LTGVRNGVPI GPQGGSSWLY IYPQGFRDLL LYIKKYYGNP PIYITENGVD 300 EKNNKSLPLK EALKDDTRIY YYRTHLLSML SAIKEGANVK GYFAWSLLDN FEWANGYTVR 360 FGIYFVDYND GYKRYPKKSA YWFKKFLEK* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 4.0e-103 | 5 | 388 | 389 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 2.0e-103 | 6 | 387 | 388 | + beta-glucosidase | ||
COG2723 | BglB | 5.0e-104 | 8 | 385 | 390 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 1.0e-116 | 6 | 383 | 381 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-149 | 5 | 389 | 389 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAG94781.1 | 0 | 1 | 389 | 3 | 391 | unnamed protein product [Oryza sativa Japonica Group] |
EMBL | CAH66812.1 | 0 | 1 | 389 | 122 | 510 | OSIGBa0135C13.7 [Oryza sativa (indica cultivar-group)] |
RefSeq | NP_001053070.1 | 0 | 1 | 389 | 7 | 395 | Os04g0474800 [Oryza sativa (japonica cultivar-group)] |
Swiss-Prot | Q7XKV4 | 0 | 1 | 389 | 122 | 510 | BGL12_ORYSJ RecName: Full=Beta-glucosidase 12; Short=Os4bglu12; Flags: Precursor |
RefSeq | XP_002448027.1 | 0 | 1 | 389 | 124 | 512 | hypothetical protein SORBIDRAFT_06g019840 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 1 | 389 | 117 | 505 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3ptq_A | 0 | 1 | 389 | 117 | 505 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3ptm_B | 0 | 1 | 389 | 117 | 505 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3ptm_A | 0 | 1 | 389 | 117 | 505 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3ptk_B | 0 | 1 | 389 | 117 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE656395 | 234 | 1 | 234 | 0 |
JG831555 | 238 | 73 | 310 | 0 |
EE590590 | 391 | 1 | 389 | 0 |
FE639979 | 215 | 100 | 314 | 0 |
JG913334 | 292 | 90 | 381 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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