Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00059532m |
Family | GH100 |
Protein Properties | Length: 622 Molecular Weight: 69435.3 Isoelectric Point: 5.7084 |
Chromosome | Chromosome/Scaffold: 014971 Start: 696 End: 6445 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 133 | 591 | 0 |
SPEEKEAWWLLGRAVVNYCGSAVGTLAANDPSTSQMLNYDQVFIRDFVPSAIAFLLKGESEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRSVP LDGNSEAFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLSDGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQ ALFYSVLRCAREMIGVNDGSKNLIRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSHDAINKFNIYPEQIPSWLADWIPVKGGYLIGNLQPAHMD FRFFSLGNLWAIVSSLATQRQAEGILNLIEAKWDDIVANMPLKICYPALEYEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRRDLARRAVE VAEKRLSDDKWPEYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPEMASILICDED |
Full Sequence |
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Protein Sequence Length: 622 Download |
MAAAAISHLR RGAQRHALLC LSLSRRRFSS SAASPLAAAA RRLLSTTVDA GTSSSGEHYK 60 PPPFDPFRAA TLSPSAPQLE SPPIEDEPPS SPPPPEEAVA SEAAHEQATL ACQEVELEGL 120 KAGVEAVKSR EESPEEKEAW WLLGRAVVNY CGSAVGTLAA NDPSTSQMLN YDQVFIRDFV 180 PSAIAFLLKG ESEIVKNFLL HTLQLQSWEK TVDCYSPGQG LMPASFKVRS VPLDGNSEAF 240 EEVLDPDFGE SAIGRVAPVD SGLWWIILLR AYGKITGDYA LQERVDVQTG IRLILNLCLS 300 DGFDMFPTLL VTDGSCMIDR RMGIHGHPLE IQALFYSVLR CAREMIGVND GSKNLIRAIN 360 NRLSALSFHI REYYWVDMKK INEIYRYKTE EYSHDAINKF NIYPEQIPSW LADWIPVKGG 420 YLIGNLQPAH MDFRFFSLGN LWAIVSSLAT QRQAEGILNL IEAKWDDIVA NMPLKICYPA 480 LEYEEWRIIT GSDPKNTPWS YHNGGSWPTL LWQFTLACIK MGRRDLARRA VEVAEKRLSD 540 DKWPEYYDTR TGRFIGKQSR LYQTWTIAGY LSSKMLLDCP EMASILICDE DFELLEGCAC 600 SLNKSARTKC SRRAAKSQVL V* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 0.0001 | 487 | 575 | 92 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
pfam12899 | Glyco_hydro_100 | 0 | 138 | 580 | 443 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 136 | 621 | 486 | + beta-fructofuranosidase | ||
PLN03005 | PLN03005 | 0 | 129 | 591 | 463 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 0 | 119 | 594 | 479 | + beta-fructofuranosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN34188.1 | 0 | 61 | 618 | 84 | 624 | unknown [Zea mays] |
GenBank | EEC75120.1 | 0 | 1 | 618 | 1 | 625 | hypothetical protein OsI_11302 [Oryza sativa Indica Group] |
RefSeq | NP_001049936.1 | 0 | 1 | 621 | 1 | 628 | Os03g0314800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002280462.1 | 0 | 123 | 621 | 173 | 672 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002465359.1 | 0 | 1 | 621 | 1 | 626 | hypothetical protein SORBIDRAFT_01g037120 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO811217 | 496 | 128 | 622 | 0 |
HO779905 | 409 | 214 | 622 | 0 |
HO466454 | 471 | 137 | 607 | 0 |
GT033923 | 322 | 253 | 574 | 0 |
DV161952 | 319 | 209 | 527 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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