CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00059833m
FamilyGH16
Protein PropertiesLength: 280 Molecular Weight: 30824.3 Isoelectric Point: 4.4872
ChromosomeChromosome/Scaffold: 015070 Start: 3382 End: 4744
DescriptionXyloglucan endotransglucosylase/hydrolase family protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16432069.7e-27
  DASGQQVAMLNLDRSSGAGFNSKEQYLYGEFSIQMKLIPGNSAGTVSCFYLSSGDSDDHDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPA
  ADYHTYTIVWNPTNILFKVDGTVIRCFKRYDDLPYPSSRPMALHATLWDGSYWATEKGKVSIDW
Full Sequence
Protein Sequence     Length: 280     Download
MAARLPPLAL LAASLAVMAA VASADSWLYE KFNTDGTVRA DYDASGQQVA MLNLDRSSGA    60
GFNSKEQYLY GEFSIQMKLI PGNSAGTVSC FYLSSGDSDD HDEIDMEFMG NSSGQPVVLN    120
TNVWASGDGK KEHQFDLWFD PAADYHTYTI VWNPTNILFK VDGTVIRCFK RYDDLPYPSS    180
RPMALHATLW DGSYWATEKG KVSIDWAGAP FVVSYRGYSA DACVSGGACP AGSDRWMNKQ    240
PDAAEWGTVK WAESNYMRYN YCEDGWRFPQ GLPAECSRS*                          300
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd02183GH16_fungal_CRH1_transglycosylase4.0e-1669208146+
cd02175GH16_lichenase1.0e-1858210155+
pfam00722Glyco_hydro_168.0e-6646208164+
PLN03161PLN031614.0e-7252278239+
cd02176GH16_XET9.0e-11529276258+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG37530.102527925280xyloglucan endotransglycosylase/hydrolase protein 8 precursor [Zea mays]
GenBankACN28585.102527925280unknown [Zea mays]
RefSeqNP_001105166.102527925280xyloglucan endo-transglycosylase/hydrolase [Zea mays]
RefSeqXP_002446422.102527926280hypothetical protein SORBIDRAFT_06g015880 [Sorghum bicolor]
RefSeqXP_002446425.102327820276hypothetical protein SORBIDRAFT_06g015930 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B04527834274A Chain A, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a Crystallized Without Acetyl Coenzyme-A
PDB1un1_A04527834274A Chain A, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a Crystallized Without Acetyl Coenzyme-A
PDB1umz_B04527834274A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A04527834274A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2uwb_B05427644267A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Transmembrane Domains
StartEnd
729
Signal Peptide
Cleavage Site
24
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EE047776257252800
EC901295257252800
EE157049257252800
EE154499257252800
EE046191245252680
Orthologous Group
SpeciesID
Brachypodium distachyonBradi1g09690.1Bradi1g09700.1Bradi3g18590.1Bradi3g18600.1Bradi5g20718.1
Oryza sativaLOC_Os08g13920.1
Panicum virgatumPavirv00014997mPavirv00060809mPavirv00011489mPavirv00022766mPavirv00032512m
Pavirv00011651mPavirv00065073mPavirv00039266mPavirv00018963m
Setaria italicaSi014242mSi014194mSi014232mSi014215mSi014233m
Sorghum bicolorSb06g015930.1Sb06g015880.1Sb06g015940.1Sb07g009410.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny