Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00060290m |
Family | CE10 |
Protein Properties | Length: 332 Molecular Weight: 34532.9 Isoelectric Point: 4.8805 |
Chromosome | Chromosome/Scaffold: 014773 Start: 298 End: 1293 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE10 | 41 | 327 | 5.60519e-45 |
GVASRDVTIDAATGLRARLYLPDPSARPGDGDGGRLPVVLYFHGGGLVAGSAADAPEHAFVNRLAARAGALAVSVEYRLAPEHPVPACYDDAWAALLWAT AAGGAAAADPWVRDRGDAARVFAVGFSAGGNVAHSLAARAGSEPGLLPRGARVEGAALLHPFFLSSSPGEKAAEGEEKYAWVRGKLAEMWAFACGGRTAG SDDPRVNPLADGAPSLRRLGCGRVLVCLAEDALAAEGRAYYDALLASGWAAGDAELLDSRPADHEFHLREPESAEAVLLMDRLVALI |
Full Sequence |
---|
Protein Sequence Length: 332 Download |
MDPDAEVTFE FVPVIRQYRS GRVERLLPVN PVPPSVDAAT GVASRDVTID AATGLRARLY 60 LPDPSARPGD GDGGRLPVVL YFHGGGLVAG SAADAPEHAF VNRLAARAGA LAVSVEYRLA 120 PEHPVPACYD DAWAALLWAT AAGGAAAADP WVRDRGDAAR VFAVGFSAGG NVAHSLAARA 180 GSEPGLLPRG ARVEGAALLH PFFLSSSPGE KAAEGEEKYA WVRGKLAEMW AFACGGRTAG 240 SDDPRVNPLA DGAPSLRRLG CGRVLVCLAE DALAAEGRAY YDALLASGWA AGDAELLDSR 300 PADHEFHLRE PESAEAVLLM DRLVALIAGD R* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00312 | Esterase_lipase | 0.0006 | 73 | 205 | 139 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
PRK10162 | PRK10162 | 0.0002 | 37 | 126 | 92 | + acetyl esterase; Provisional | ||
pfam00135 | COesterase | 0.0001 | 72 | 208 | 146 | + Carboxylesterase family. | ||
COG0657 | Aes | 3.0e-19 | 37 | 314 | 284 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 2.0e-35 | 79 | 308 | 236 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF86971.2 | 0 | 1 | 330 | 1 | 328 | unknown [Zea mays] |
GenBank | EAZ07336.1 | 0 | 2 | 329 | 3 | 318 | hypothetical protein OsI_29585 [Oryza sativa Indica Group] |
RefSeq | NP_001062035.1 | 0 | 2 | 329 | 3 | 318 | Os08g0475300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147183.1 | 0 | 1 | 330 | 1 | 328 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002444519.1 | 0 | 1 | 329 | 1 | 333 | hypothetical protein SORBIDRAFT_07g023140 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 8e-27 | 32 | 330 | 60 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 2zsh_A | 8e-27 | 32 | 330 | 60 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 3e-26 | 32 | 288 | 52 | 312 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 3e-26 | 32 | 288 | 52 | 312 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 3e-26 | 32 | 288 | 52 | 312 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DR969195 | 207 | 1 | 205 | 0 |
DV513282 | 317 | 6 | 318 | 0 |
DR735440 | 329 | 1 | 328 | 0 |
EL690500 | 282 | 4 | 283 | 0 |
DY822650 | 323 | 4 | 325 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|