Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00060429m |
Family | GT77 |
Protein Properties | Length: 193 Molecular Weight: 22417.8 Isoelectric Point: 8.7159 |
Chromosome | Chromosome/Scaffold: 0155890 Start: 63 End: 1820 |
Description | Nucleotide-diphospho-sugar transferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT77 | 2 | 159 | 0 |
FMSKDYLEMMWGRNRFQQTVLELGYNFLFTDVDVMWFRDPFRHISMAADIAISSDVYMGDPYSLRNFPNGGFLFVRSSAKTIDFYRAWQQGRWRFFGKHE QDVFNLIKHDMAAKLDLAIQFLDTTYISGFCQLSKDLNKICTLHANCCVGLGAKLHDL |
Full Sequence |
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Protein Sequence Length: 193 Download |
MFMSKDYLEM MWGRNRFQQT VLELGYNFLF TDVDVMWFRD PFRHISMAAD IAISSDVYMG 60 DPYSLRNFPN GGFLFVRSSA KTIDFYRAWQ QGRWRFFGKH EQDVFNLIKH DMAAKLDLAI 120 QFLDTTYISG FCQLSKDLNK ICTLHANCCV GLGAKLHDLR GVLDVWRNYT AGTPQDRRAG 180 KFQWKLPGIC IH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 3.0e-55 | 2 | 159 | 167 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO37940.1 | 0 | 1 | 192 | 188 | 379 | putative regulatory protein [Oryza sativa Japonica Group] |
GenBank | ABF99911.1 | 0 | 1 | 192 | 200 | 391 | regulatory protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC76536.1 | 0 | 2 | 192 | 198 | 388 | hypothetical protein OsI_14328 [Oryza sativa Indica Group] |
RefSeq | NP_001130717.1 | 0 | 1 | 192 | 175 | 366 | hypothetical protein LOC100191821 [Zea mays] |
RefSeq | XP_002466101.1 | 0 | 1 | 192 | 180 | 371 | hypothetical protein SORBIDRAFT_01g001260 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL919422 | 192 | 2 | 193 | 0 |
DV505192 | 193 | 1 | 193 | 0 |
EB814693 | 193 | 1 | 193 | 0 |
FL915947 | 181 | 1 | 181 | 0 |
FL839952 | 193 | 1 | 193 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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