Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00060522m |
Family | AA2 |
Protein Properties | Length: 369 Molecular Weight: 39505.4 Isoelectric Point: 5.0237 |
Chromosome | Chromosome/Scaffold: 0155568 Start: 1106 End: 2441 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 88 | 346 | 0 |
ADSNVAAALVRLFFHDCFIHGCDASVLLDRVGGRRSERDAGPNKSLRGFGAVEAIKQRVEAACPGTVSCADILALAARDSLVLVGGPTYPVLTGRRDSTA SFYYEAAVAGNIPAPNATYAMTLDAFARRGFTERETVALLGAHSIGKVRCRFFTDRIYNFAGTGAPDDSIDPDMVGEMRAVCGGDGGAPMEMGYYRQGRE VGFGAHYYAELLEGRGILRADQQLTAGSTVRWVRVYASGARGEEVFREDFAHAMVKLSA |
Full Sequence |
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Protein Sequence Length: 369 Download |
MLGPLARGAL CLLAVSIVLC NGDPRSDATR SAAVLSLEDY EDSGDDSSSF SFTFPETRPR 60 GLVFGFYDET CPDAEEIVSS TVRRLYHADS NVAAALVRLF FHDCFIHGCD ASVLLDRVGG 120 RRSERDAGPN KSLRGFGAVE AIKQRVEAAC PGTVSCADIL ALAARDSLVL VGGPTYPVLT 180 GRRDSTASFY YEAAVAGNIP APNATYAMTL DAFARRGFTE RETVALLGAH SIGKVRCRFF 240 TDRIYNFAGT GAPDDSIDPD MVGEMRAVCG GDGGAPMEMG YYRQGREVGF GAHYYAELLE 300 GRGILRADQQ LTAGSTVRWV RVYASGARGE EVFREDFAHA MVKLSAIAPL TGSDGQLRIS 360 CSKPVEEN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00314 | plant_peroxidase_like | 4.0e-23 | 76 | 345 | 300 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 7.0e-61 | 78 | 232 | 156 | + Peroxidase. | ||
PLN03030 | PLN03030 | 5.0e-79 | 58 | 362 | 308 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 5.0e-142 | 61 | 363 | 308 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF85842.1 | 0 | 77 | 368 | 1 | 293 | unknown [Zea mays] |
GenBank | ACF88167.1 | 0 | 1 | 368 | 3 | 381 | unknown [Zea mays] |
EMBL | CAH69260.1 | 0 | 14 | 366 | 14 | 366 | TPA: class III peroxidase 18 precursor [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC71376.1 | 0 | 1 | 356 | 1 | 356 | hypothetical protein OsI_03489 [Oryza sativa Indica Group] |
RefSeq | XP_002453827.1 | 0 | 2 | 365 | 4 | 387 | hypothetical protein SORBIDRAFT_04g019270 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 66 | 363 | 7 | 302 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
PDB | 1pa2_A | 0 | 66 | 363 | 7 | 302 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1sch_B | 0 | 62 | 363 | 2 | 292 | A Chain A, Peanut Peroxidase |
PDB | 1sch_A | 0 | 62 | 363 | 2 | 292 | A Chain A, Peanut Peroxidase |
PDB | 1gw2_A | 0 | 66 | 361 | 6 | 301 | A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |