Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00060534m |
Family | GH1 |
Protein Properties | Length: 503 Molecular Weight: 57590.9 Isoelectric Point: 8.5445 |
Chromosome | Chromosome/Scaffold: 015178 Start: 3467 End: 8027 |
Description | beta glucosidase 13 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 28 | 501 | 0 |
RSQFPRGFLFGTASSAYQYEGAVREGGRGPSIWDTYTHTHPEKIANGSNGDIAIDSYHRYQEDVKIMKDIGFNAYRFSISWTRILPNGKLSGGINMEGIK YYDNLINKLISEGVEPFVTLFHWDSPQALEQQYGGFLSHHIVEDFRDYANICFKEFGDRVKNWITFNEPWSFSVGGYASGILAPGRCSSWKNSGCSIGDS GKEPYIVAHNQLLAHAAAVQVYRDKYQGKQKGKIGITLVSNWMIPYSNSKKDKDAAKRELEFMYGWFMDPLTNGDYPLSMKTLAGNRLPRFTKEQSNAIN GSFDFIGLNYYTSRYIQNANYSNSVNKSYDTDSLTNQTVERHGTAIGPKAGSPWLYIYPKGIEELLLYTKKTYNNPTIYITENGVDEINNENLPLQEALV DNTRIEFYRQHLFHIQRAVREGADVRGYFAWSLFDNFEWMDGYTVRFGINYIDYKDGLKRYPKHSSKWFQDFLH |
Full Sequence |
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Protein Sequence Length: 503 Download |
MPRISPLLLL LPFFFAVSTA KPEKIISRSQ FPRGFLFGTA SSAYQYEGAV REGGRGPSIW 60 DTYTHTHPEK IANGSNGDIA IDSYHRYQED VKIMKDIGFN AYRFSISWTR ILPNGKLSGG 120 INMEGIKYYD NLINKLISEG VEPFVTLFHW DSPQALEQQY GGFLSHHIVE DFRDYANICF 180 KEFGDRVKNW ITFNEPWSFS VGGYASGILA PGRCSSWKNS GCSIGDSGKE PYIVAHNQLL 240 AHAAAVQVYR DKYQGKQKGK IGITLVSNWM IPYSNSKKDK DAAKRELEFM YGWFMDPLTN 300 GDYPLSMKTL AGNRLPRFTK EQSNAINGSF DFIGLNYYTS RYIQNANYSN SVNKSYDTDS 360 LTNQTVERHG TAIGPKAGSP WLYIYPKGIE ELLLYTKKTY NNPTIYITEN GVDEINNENL 420 PLQEALVDNT RIEFYRQHLF HIQRAVREGA DVRGYFAWSL FDNFEWMDGY TVRFGINYID 480 YKDGLKRYPK HSSKWFQDFL HK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 2.0e-145 | 16 | 500 | 486 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 2.0e-145 | 27 | 501 | 483 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 2.0e-146 | 16 | 500 | 487 | + beta-glucosidase | ||
TIGR03356 | BGL | 5.0e-166 | 32 | 496 | 468 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 0 | 27 | 499 | 479 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC80501.1 | 0 | 18 | 501 | 20 | 503 | hypothetical protein OsI_22753 [Oryza sativa Indica Group] |
RefSeq | NP_001057511.1 | 0 | 18 | 501 | 122 | 579 | Os06g0320200 [Oryza sativa (japonica cultivar-group)] |
Swiss-Prot | Q5Z9Z0 | 0 | 18 | 501 | 20 | 503 | BGL24_ORYSJ RecName: Full=Beta-glucosidase 24; Short=Os6bglu24; Flags: Precursor |
RefSeq | XP_002438325.1 | 0 | 16 | 446 | 17 | 447 | hypothetical protein SORBIDRAFT_10g012220 [Sorghum bicolor] |
RefSeq | XP_002448027.1 | 0 | 26 | 502 | 36 | 512 | hypothetical protein SORBIDRAFT_06g019840 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 15 | 502 | 19 | 505 | B Chain B, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat |
PDB | 3ptq_A | 0 | 15 | 502 | 19 | 505 | B Chain B, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat |
PDB | 3ptm_B | 0 | 15 | 502 | 19 | 505 | B Chain B, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat |
PDB | 3ptm_A | 0 | 15 | 502 | 19 | 505 | B Chain B, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat |
PDB | 3ptk_B | 0 | 15 | 502 | 19 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |