Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00060594m |
Family | GT8 |
Protein Properties | Length: 531 Molecular Weight: 59455.2 Isoelectric Point: 9.6889 |
Chromosome | Chromosome/Scaffold: 015198 Start: 3371 End: 6409 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 187 | 501 | 0 |
CLAVRLTAERIATPEQYADPVPPPRALEDPALFHYAIFSDNVLAASCVVRSAVANSNDPSKHVFHVVTDRMNLGAMQVIIHRMDLKGAHYEVKAFEDYKF LNSSYVPVLRQLESANLQKFYFENKLENATKDASNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFGSF HRYWQYMNFSHPLIKAKFSPNACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMEEIRN AAVVHFNGNMKPWLD |
Full Sequence |
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Protein Sequence Length: 531 Download |
MAAAAGSPWR SAGPVASLAL LLLLLLATAA APAAAGGGSA AMNGDRLRAE QIRKQASDAA 60 ASAAALAAAS RRLHLDRARH LRLLSSLHRN LTNTLRALSL AADADPSASD PAANASSPRQ 120 LDLQAKDLIR AARAAIAESK PLFDPQLKIQ RLKDAIFAQN ELLARAKKRG AFASLIAAKS 180 IPKPLHCLAV RLTAERIATP EQYADPVPPP RALEDPALFH YAIFSDNVLA ASCVVRSAVA 240 NSNDPSKHVF HVVTDRMNLG AMQVIIHRMD LKGAHYEVKA FEDYKFLNSS YVPVLRQLES 300 ANLQKFYFEN KLENATKDAS NMKFRNPKYL SMLNHLRFYL PEMYPKLHRI LFLDDDVVVQ 360 RDLTGLWKID MDGKVNGAVE TCFGSFHRYW QYMNFSHPLI KAKFSPNACG WAYGMNFFDL 420 DSWRREKCTE QYHYWQNQNE NRTLWKLGTL PPGLITFYST TKPLDKSWHV LGLGYNPSIS 480 MEEIRNAAVV HFNGNMKPWL DIGMNQFRHL WTKYVDYDDE YIRQCNFAPP * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd06429 | GT8_like_1 | 2.0e-121 | 219 | 516 | 300 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
PLN02910 | PLN02910 | 1.0e-167 | 167 | 526 | 361 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 3.0e-176 | 149 | 529 | 384 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 4.0e-177 | 124 | 527 | 408 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 119 | 529 | 412 | + galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD23465.1 | 0 | 43 | 530 | 42 | 533 | putative glycosyl transferase [Oryza sativa Japonica Group] |
GenBank | EEC73220.1 | 0 | 43 | 530 | 42 | 533 | hypothetical protein OsI_07307 [Oryza sativa Indica Group] |
RefSeq | NP_001046899.1 | 0 | 43 | 530 | 72 | 563 | Os02g0498700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002301803.1 | 0 | 3 | 528 | 9 | 553 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002453869.1 | 0 | 39 | 530 | 35 | 534 | hypothetical protein SORBIDRAFT_04g020140 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |