Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00060730m |
Family | CE10 |
Protein Properties | Length: 318 Molecular Weight: 33551.8 Isoelectric Point: 6.5103 |
Chromosome | Chromosome/Scaffold: 015115 Start: 3013 End: 4139 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE10 | 19 | 315 | 0 |
LYKDGRAERTRAACHTAPAGFDAETGVTSKDVVIDAATGVAARLYLPSVQVAATAKLPVLVFYHGGYFVVGSPFHPLFHRYVNSLAAAARVVAVSVRYRL APEHPLPAAYDDSWAALGWVASGADPWLTDHGDLGRVFLSGVSAGANIAHNMAVAAGVGGLRAGTPPRVQGVILLHPSFASEQKTEEEDEASWRANKDRW AVIFPGANGGLDDPRINPMAAGAPSLAKLAGERLLVSTASVDPRAPRGRAYCDAVRASGWRGELECFESEGEHGFFVPEHGSREAAKLMDRVADFLA |
Full Sequence |
---|
Protein Sequence Length: 318 Download |
MDSGGAAAEV VYSCGYFRLY KDGRAERTRA ACHTAPAGFD AETGVTSKDV VIDAATGVAA 60 RLYLPSVQVA ATAKLPVLVF YHGGYFVVGS PFHPLFHRYV NSLAAAARVV AVSVRYRLAP 120 EHPLPAAYDD SWAALGWVAS GADPWLTDHG DLGRVFLSGV SAGANIAHNM AVAAGVGGLR 180 AGTPPRVQGV ILLHPSFASE QKTEEEDEAS WRANKDRWAV IFPGANGGLD DPRINPMAAG 240 APSLAKLAGE RLLVSTASVD PRAPRGRAYC DAVRASGWRG ELECFESEGE HGFFVPEHGS 300 REAAKLMDRV ADFLAGY* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00135 | COesterase | 0.006 | 74 | 97 | 24 | + Carboxylesterase family. | ||
COG0657 | Aes | 1.0e-19 | 24 | 315 | 296 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 7.0e-29 | 78 | 294 | 224 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28069.1 | 0 | 1 | 315 | 1 | 313 | unknown [Zea mays] |
RefSeq | NP_001063360.1 | 0 | 1 | 317 | 1 | 319 | Os09g0455900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146161.1 | 0 | 1 | 314 | 1 | 327 | hypothetical protein LOC100279730 [Zea mays] |
RefSeq | XP_002462487.1 | 0 | 1 | 317 | 1 | 327 | hypothetical protein SORBIDRAFT_02g026550 [Sorghum bicolor] |
RefSeq | XP_002462487.1 | 0 | 10 | 314 | 321 | 631 | hypothetical protein SORBIDRAFT_02g026550 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ed1_F | 3e-32 | 36 | 314 | 53 | 347 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ed1_E | 3e-32 | 36 | 314 | 53 | 347 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ed1_D | 3e-32 | 36 | 314 | 53 | 347 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ed1_C | 3e-32 | 36 | 314 | 53 | 347 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ed1_B | 3e-32 | 36 | 314 | 53 | 347 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
FL846155 | 217 | 1 | 217 | 0 |
FL846156 | 187 | 132 | 318 | 0 |
FL780299 | 246 | 45 | 288 | 0 |
CT847751 | 268 | 1 | 264 | 0 |
FL846155 | 42 | 214 | 255 | 0.000000000000008 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|