Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00060825m |
Family | AA1 |
Protein Properties | Length: 585 Molecular Weight: 63394.7 Isoelectric Point: 8.6432 |
Chromosome | Chromosome/Scaffold: 015647 Start: 2602 End: 6101 |
Description | laccase 17 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 34 | 572 | 0 |
TRYYDFNVTMANVTRLCATKSIVTVNGQFPGPKLVAREADRVVVRVTNHAQHNISLHWHGIRQLRTGWADGPAYITQCPIQTGQSYVYNFTITGQRGTLW WHAHISWLRATVYGPLVVLPKLGVPYPFPAPYKEVPVIFGEWWQADTEVVIKQAVQTGGGPNVSDAHTINGLPGPLYNCSAKDTYKLKVKPGKTYMLRLI NAALNDELFFSVANHSLTVVEVDAVYVKPFTVDTLIISPGQTTNVLLTAKPFYPGANYYMSAAPYSTARSGTFDNTTVAGILEYEYPDAAPAAPSFNKAL PLHKPALPALNDTNFVGNFTAKLRSLATPQYPAAVPTAVDRKFFFTVGLGTHPCPANTTCQGPTNTTQFAASVNNVSFVLPTRALLHSHFTGLSTGVYSP DFPVSPLTPFNYTGTPPNNTNVASGTKLMVIPYGASVELVMQGTSILGIESHPLHLHGFNFFVVGQGYGNYDPVKDPAKFNLVDPVERNTVGVPAGGWVA IRFLADNPGVWFMHCHLEAHTSWGLRMAWLVLDGSLPHQ |
Full Sequence |
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Protein Sequence Length: 585 Download |
MAMALSSSSS ALPCSLLIAA LMLLASITQV QGITRYYDFN VTMANVTRLC ATKSIVTVNG 60 QFPGPKLVAR EADRVVVRVT NHAQHNISLH WHGIRQLRTG WADGPAYITQ CPIQTGQSYV 120 YNFTITGQRG TLWWHAHISW LRATVYGPLV VLPKLGVPYP FPAPYKEVPV IFGEWWQADT 180 EVVIKQAVQT GGGPNVSDAH TINGLPGPLY NCSAKDTYKL KVKPGKTYML RLINAALNDE 240 LFFSVANHSL TVVEVDAVYV KPFTVDTLII SPGQTTNVLL TAKPFYPGAN YYMSAAPYST 300 ARSGTFDNTT VAGILEYEYP DAAPAAPSFN KALPLHKPAL PALNDTNFVG NFTAKLRSLA 360 TPQYPAAVPT AVDRKFFFTV GLGTHPCPAN TTCQGPTNTT QFAASVNNVS FVLPTRALLH 420 SHFTGLSTGV YSPDFPVSPL TPFNYTGTPP NNTNVASGTK LMVIPYGASV ELVMQGTSIL 480 GIESHPLHLH GFNFFVVGQG YGNYDPVKDP AKFNLVDPVE RNTVGVPAGG WVAIRFLADN 540 PGVWFMHCHL EAHTSWGLRM AWLVLDGSLP HQKLLPPPSD LPKC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 6.0e-45 | 40 | 154 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 1.0e-61 | 50 | 558 | 538 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 8.0e-71 | 30 | 560 | 554 | + oxidoreductase | ||
TIGR03388 | ascorbase | 9.0e-81 | 34 | 558 | 552 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 32 | 584 | 554 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28855.1 | 0 | 1 | 584 | 1 | 585 | unknown [Zea mays] |
GenBank | EAZ14115.1 | 0 | 29 | 584 | 23 | 577 | hypothetical protein OsJ_04039 [Oryza sativa Japonica Group] |
RefSeq | NP_001105875.1 | 0 | 9 | 584 | 4 | 587 | putative laccase [Zea mays] |
RefSeq | NP_001146658.1 | 0 | 9 | 584 | 4 | 584 | hypothetical protein LOC100280258 [Zea mays] |
RefSeq | XP_002458746.1 | 0 | 9 | 584 | 4 | 579 | hypothetical protein SORBIDRAFT_03g039520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 35 | 558 | 4 | 517 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
PDB | 1asq_A | 0 | 35 | 558 | 4 | 517 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
PDB | 1asp_B | 0 | 35 | 558 | 4 | 517 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
PDB | 1asp_A | 0 | 35 | 558 | 4 | 517 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
PDB | 1aso_B | 0 | 35 | 558 | 4 | 517 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |