y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00060992m |
Family | GH1 |
Protein Properties | Length: 539 Molecular Weight: 60820.5 Isoelectric Point: 6.734 |
Chromosome | Chromosome/Scaffold: 001123 Start: 2401 End: 6048 |
Description | beta glucosidase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 66 | 522 | 0 |
EMQVEGAVAEDGRKPSIWDTFTHGGYSINNATGDVTADQYHKYKEDVKLLHEMGVDAYRMSIAWPRLIPDGRGAVNPKGLEYYNNLIDELLSYGIQPHVT IYHFDLPQALQDEYNGLLSPRFIEDFTAYADVCFKNFGDRVKYWSTVNEPNIEPIGGYDQGINPPRRCSYPFGLACEEGNSTTEPYIVAHHLLLAHASAV SLYREKYQAEQGGRIGLTLLGWWYEPATETPDDIAAAARMNDFHIGWFMHPMVYGDYPPVMRKNVGSRLPSFTDEERKRVMGSFDFVGFNHYIVVYVKAD LSRLDQKLRDYMFDAAVAYDMPVLKSNNQFPFGLTNDFMTSTPWALNKMLKHLQVKYKNPAVMIHENGAASQPDPSGANTYDDEFRSQFLQDYIEATLHS IRNGSNVQGYFVWSFLDVFEYLFGYRLGFGVYGVDFNSTERTRYQRHSAKWYSSFLR |
Full Sequence |
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Protein Sequence Length: 539 Download |
MPPPVHHEHA PPLSAAVRAR RLITRTPGIA HRPSPARGPR ASVDARRPFP ACGPVRAGRC 60 PSAGGEMQVE GAVAEDGRKP SIWDTFTHGG YSINNATGDV TADQYHKYKE DVKLLHEMGV 120 DAYRMSIAWP RLIPDGRGAV NPKGLEYYNN LIDELLSYGI QPHVTIYHFD LPQALQDEYN 180 GLLSPRFIED FTAYADVCFK NFGDRVKYWS TVNEPNIEPI GGYDQGINPP RRCSYPFGLA 240 CEEGNSTTEP YIVAHHLLLA HASAVSLYRE KYQAEQGGRI GLTLLGWWYE PATETPDDIA 300 AAARMNDFHI GWFMHPMVYG DYPPVMRKNV GSRLPSFTDE ERKRVMGSFD FVGFNHYIVV 360 YVKADLSRLD QKLRDYMFDA AVAYDMPVLK SNNQFPFGLT NDFMTSTPWA LNKMLKHLQV 420 KYKNPAVMIH ENGAASQPDP SGANTYDDEF RSQFLQDYIE ATLHSIRNGS NVQGYFVWSF 480 LDVFEYLFGY RLGFGVYGVD FNSTERTRYQ RHSAKWYSSF LRGGELRPVA LPDGAYSQ* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03356 | BGL | 8.0e-120 | 68 | 517 | 451 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 3.0e-142 | 68 | 523 | 460 | + Glycosyl hydrolase family 1. | ||
PLN02814 | PLN02814 | 1.0e-149 | 62 | 523 | 463 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 1.0e-157 | 68 | 523 | 457 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 2.0e-163 | 62 | 523 | 462 | + beta-glucosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACR38197.1 | 0 | 68 | 538 | 62 | 533 | unknown [Zea mays] |
Swiss-Prot | B7F7K7 | 0 | 68 | 528 | 49 | 510 | BGL31_ORYSJ RecName: Full=Beta-glucosidase 31; Short=Os9bglu31; Flags: Precursor |
GenBank | EEC84871.1 | 0 | 68 | 528 | 49 | 510 | hypothetical protein OsI_32014 [Oryza sativa Indica Group] |
RefSeq | NP_001063638.1 | 0 | 68 | 528 | 49 | 510 | Os09g0511600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002438585.1 | 0 | 68 | 534 | 62 | 533 | hypothetical protein SORBIDRAFT_10g022300 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 62 | 522 | 25 | 487 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |
PDB | 3gnp_A | 0 | 62 | 522 | 25 | 487 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |
PDB | 3gno_A | 0 | 62 | 522 | 25 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 68 | 522 | 34 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 68 | 522 | 34 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG968420 | 272 | 268 | 539 | 0 |
GO858337 | 315 | 111 | 424 | 0 |
JG932362 | 272 | 268 | 539 | 0 |
JG885111 | 266 | 274 | 539 | 0 |
GO855768 | 297 | 68 | 363 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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