Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00061855m |
Family | GH9 |
Protein Properties | Length: 496 Molecular Weight: 53159.1 Isoelectric Point: 8.9735 |
Chromosome | Chromosome/Scaffold: 001131 Start: 23866 End: 25491 |
Description | cellulase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 29 | 487 | 0 |
NYADALAKSIIFFEGQRSGKLPPGNRMAWRGDSGLKDGAQYNVDLVGGYYDAGDNVKFGLPMAFTTTMLAWSVADMGKFMGGELPHARAAVRWGADYLLK AATSTPDTLYVQVGDPNQDHRCWERPEDMDTPRSVYAVTKDRPGSDVAAETAAALAASAVAFRRADPAYSSRLLHAAMRAFELADRHRGSYSAGALSSVV CPFYCSYSGYQDELLWAAAWLHRASNNASFMSYVRANGMQLGAGDDDFSFSWDDKRAGTKVLLAKGFLRRRLQGLQLYKAHSDSYICSLVPGTSGFQASQ FTPGGLIYKEGGSNMQYVTTATFLLVAYARYLRSAGACAVCGGRDVAPAELVALARRQVDYILGKNPAGTSYMVGFGGRYPRRLHHRGASMPSVRAHPGR IGCDEGFRYLHSGAADANVLVGAVVGGPDARDGFVDDRDGYGQTEPATYINAPLVGALA |
Full Sequence |
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Protein Sequence Length: 496 Download |
MAPKTAGRSR VLAALHLLLL APGLAAAFNY ADALAKSIIF FEGQRSGKLP PGNRMAWRGD 60 SGLKDGAQYN VDLVGGYYDA GDNVKFGLPM AFTTTMLAWS VADMGKFMGG ELPHARAAVR 120 WGADYLLKAA TSTPDTLYVQ VGDPNQDHRC WERPEDMDTP RSVYAVTKDR PGSDVAAETA 180 AALAASAVAF RRADPAYSSR LLHAAMRAFE LADRHRGSYS AGALSSVVCP FYCSYSGYQD 240 ELLWAAAWLH RASNNASFMS YVRANGMQLG AGDDDFSFSW DDKRAGTKVL LAKGFLRRRL 300 QGLQLYKAHS DSYICSLVPG TSGFQASQFT PGGLIYKEGG SNMQYVTTAT FLLVAYARYL 360 RSAGACAVCG GRDVAPAELV ALARRQVDYI LGKNPAGTSY MVGFGGRYPR RLHHRGASMP 420 SVRAHPGRIG CDEGFRYLHS GAADANVLVG AVVGGPDARD GFVDDRDGYG QTEPATYINA 480 PLVGALAYFA GTARY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 1.0e-171 | 36 | 487 | 456 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 3.0e-176 | 36 | 487 | 459 | + Glycosyl hydrolase family 9. | ||
PLN02266 | PLN02266 | 0 | 36 | 490 | 455 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 36 | 490 | 455 | + endoglucanase | ||
PLN03009 | PLN03009 | 0 | 36 | 490 | 457 | + cellulase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ05384.1 | 0 | 22 | 494 | 28 | 504 | hypothetical protein OsI_27591 [Oryza sativa Indica Group] |
GenBank | EAZ41304.1 | 0 | 22 | 494 | 28 | 504 | hypothetical protein OsJ_25815 [Oryza sativa Japonica Group] |
RefSeq | NP_001060848.1 | 0 | 22 | 494 | 47 | 523 | Os08g0114200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002299423.1 | 0 | 29 | 490 | 32 | 491 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002443762.1 | 0 | 32 | 494 | 34 | 501 | hypothetical protein SORBIDRAFT_07g001480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4tf4_B | 0 | 27 | 487 | 3 | 438 | A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis |
PDB | 4tf4_A | 0 | 27 | 487 | 3 | 438 | A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis |
PDB | 3tf4_B | 0 | 27 | 487 | 3 | 438 | A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis |
PDB | 3tf4_A | 0 | 27 | 487 | 3 | 438 | A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis |
PDB | 1tf4_B | 0 | 27 | 487 | 3 | 438 | A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis |