Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00061950m |
Family | GT8 |
Protein Properties | Length: 530 Molecular Weight: 59370 Isoelectric Point: 9.7557 |
Chromosome | Chromosome/Scaffold: 000998 Start: 1416 End: 4433 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 186 | 500 | 0 |
CLAVRLTAERIARPEQYADPVPPPRALEDPALFHYAIFSDNVLAASCVVRSAVANSNDPSKHVFHVVTDRMNLGAMQVIIRRMDLKGAHYEVKAFEDYKF LNSSYVPVLRQLESANLQKFYFENKLENATKDASNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFGSF HRYWQYMNFSHPLIKAKFSPNACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMEEIRN AAVVHFNGNMKPWLD |
Full Sequence |
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Protein Sequence Length: 530 Download |
MAAAAGSPWR SAGPVAALAL LLLLAAAPAA AAGGSAAVNG DRLRAEQIRK QASDAAASAA 60 ALAAASRRLH LDRARHLRLL SSLHRNLTNT LRALSLAADS DPSASDPAAA DANASSPRQL 120 DLQAKDLIRA ARAAIAESKP LFDPQLKIQR LKDAIFAQNE LLARAKKRGA FASLIAAKSI 180 PKPLHCLAVR LTAERIARPE QYADPVPPPR ALEDPALFHY AIFSDNVLAA SCVVRSAVAN 240 SNDPSKHVFH VVTDRMNLGA MQVIIRRMDL KGAHYEVKAF EDYKFLNSSY VPVLRQLESA 300 NLQKFYFENK LENATKDASN MKFRNPKYLS MLNHLRFYLP EMYPKLHRIL FLDDDVVVQR 360 DLTGLWKIDM DGKVNGAVET CFGSFHRYWQ YMNFSHPLIK AKFSPNACGW AYGMNFFDLD 420 SWRREKCTEQ YHYWQNQNEN RTLWKLGTLP PGLITFYSTT KPLDKSWHVL GLGYNPSISM 480 EEIRNAAVVH FNGNMKPWLD IGMNQFRHLW TKYVDYDDEY IRQCNFAPP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd06429 | GT8_like_1 | 5.0e-122 | 218 | 515 | 300 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
PLN02910 | PLN02910 | 1.0e-168 | 166 | 525 | 361 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 9.0e-176 | 148 | 528 | 384 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 9.0e-177 | 123 | 526 | 408 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 118 | 528 | 412 | + galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92560.1 | 0 | 3 | 527 | 9 | 553 | unknown [Populus trichocarpa] |
DDBJ | BAD23465.1 | 0 | 39 | 529 | 42 | 533 | putative glycosyl transferase [Oryza sativa Japonica Group] |
GenBank | EEC73220.1 | 0 | 39 | 529 | 42 | 533 | hypothetical protein OsI_07307 [Oryza sativa Indica Group] |
RefSeq | NP_001046899.1 | 0 | 39 | 529 | 72 | 563 | Os02g0498700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002453869.1 | 0 | 1 | 529 | 1 | 534 | hypothetical protein SORBIDRAFT_04g020140 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |