| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00061954m |
| Family | GH9 |
| Protein Properties | Length: 503 Molecular Weight: 54756.3 Isoelectric Point: 6.1336 |
| Chromosome | Chromosome/Scaffold: 001020 Start: 25030 End: 28860 |
| Description | glycosyl hydrolase 9B7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 32 | 488 | 0 |
| YGDALGVALQFFQVQKSGKLENNQIPWRGDSALTDGKEAGLDLSKGMYDAGDHIKFTFPMAFTATVLAWSVLEYGDQMSAAKQLDPALDALKWITDFLIA AHPSDNVLYIQVGDPDLDHNCWERPETMTEKRPLTQINKKSPGSDVAAEAAAAMAAASMVFKSSDTTYSDVLLQHAQKLFTFADTYRGLSSETYPKLQDF YNSTGYVDELLWAASWLYHSTGDQTYLSYVTVQNGKTYAEWGRPTWFSWDDKNPGTQVLLSRLNFFGSKQISNAENEGLKSYRDTAEAVICGLIPDSPQA TASRTGGGLIWISGWNSLQHATNSAFLALVYSDYMLSTRTAEVQCSGKYYSPTDIRNFAASQANYILGDNPMKLSYLVGYGSNYPQQVHHRGASIPADAK TGCKGFQYLHSPNPNPNVAMGALVGGPFQNDTFVDSRDNAVQTESSTYNSGTLVGLL | |||
| Full Sequence |
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| Protein Sequence Length: 503 Download |
| MFAIMKRKPG GKGHHKKPLP VPGPPGAIDS KYGDALGVAL QFFQVQKSGK LENNQIPWRG 60 DSALTDGKEA GLDLSKGMYD AGDHIKFTFP MAFTATVLAW SVLEYGDQMS AAKQLDPALD 120 ALKWITDFLI AAHPSDNVLY IQVGDPDLDH NCWERPETMT EKRPLTQINK KSPGSDVAAE 180 AAAAMAAASM VFKSSDTTYS DVLLQHAQKL FTFADTYRGL SSETYPKLQD FYNSTGYVDE 240 LLWAASWLYH STGDQTYLSY VTVQNGKTYA EWGRPTWFSW DDKNPGTQVL LSRLNFFGSK 300 QISNAENEGL KSYRDTAEAV ICGLIPDSPQ ATASRTGGGL IWISGWNSLQ HATNSAFLAL 360 VYSDYMLSTR TAEVQCSGKY YSPTDIRNFA ASQANYILGD NPMKLSYLVG YGSNYPQQVH 420 HRGASIPADA KTGCKGFQYL HSPNPNPNVA MGALVGGPFQ NDTFVDSRDN AVQTESSTYN 480 SGTLVGLLSG LVTTSSVAQS FT* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02171 | PLN02171 | 5.0e-145 | 32 | 480 | 458 | + endoglucanase |
| PLN02340 | PLN02340 | 2.0e-147 | 32 | 475 | 452 | + endoglucanase |
| PLN00119 | PLN00119 | 3.0e-150 | 27 | 480 | 462 | + endoglucanase |
| pfam00759 | Glyco_hydro_9 | 1.0e-166 | 32 | 479 | 456 | + Glycosyl hydrolase family 9. |
| PLN02345 | PLN02345 | 0 | 35 | 502 | 469 | + endoglucanase |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC84946.1 | 0 | 17 | 502 | 43 | 528 | hypothetical protein OsI_32163 [Oryza sativa Indica Group] |
| GenBank | EEE70113.1 | 0 | 17 | 502 | 43 | 528 | hypothetical protein OsJ_30126 [Oryza sativa Japonica Group] |
| RefSeq | NP_001063771.1 | 0 | 17 | 502 | 43 | 528 | Os09g0533900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001145749.1 | 0 | 7 | 502 | 33 | 526 | hypothetical protein LOC100279256 [Zea mays] |
| RefSeq | XP_002462729.1 | 0 | 7 | 502 | 32 | 525 | hypothetical protein SORBIDRAFT_02g030990 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 32 | 482 | 5 | 420 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 1ksc_A | 0 | 32 | 482 | 5 | 420 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 1ks8_A | 0 | 32 | 482 | 5 | 420 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 31 | 482 | 5 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 31 | 482 | 5 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EH188586 | 347 | 118 | 464 | 0 |
| GO842570 | 319 | 141 | 459 | 0 |
| FL870300 | 271 | 69 | 339 | 0 |
| JG915778 | 257 | 222 | 478 | 0 |
| EH188586 | 38 | 440 | 477 | 1.2 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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