y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00062556m |
Family | CE10 |
Protein Properties | Length: 509 Molecular Weight: 55736.9 Isoelectric Point: 9.3458 |
Chromosome | Chromosome/Scaffold: 001366 Start: 10124 End: 13935 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 208 | 474 | 0 |
QVHRSVVYGDQPRNRLDLYIPTSTAGLKPVVAFVTGGAWIIGYKGWGALLGRRLVERGIIVACIDYRNFPQGTIGDMVEDASQGISFVCNNIASYGGDPN RIYLVGQSAGAHIAACALLNQAISECGEGDSSSWSVSQIKAYFGISGGYNLLNLVDHFHRRGLYRSIFLSIMEGEESLQKFSPQVMIKESSARSAVSLLP HIILFHGTSDYSIPSAESQAFADALQQHGAKADIFLYEGKTHTDLFIQDPLRGGRDKMLEEIASVIH |
Full Sequence |
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Protein Sequence Length: 509 Download |
MTCGRGDAGP TCQGPPRRPP EHRRAGAVLR LRPFAHGEVA AGRSTVLSRR PAELLPGQKR 60 PLLPQIFTSS DQNIRVMEKP PPREYRVAAM KVELAARTSQ TGKTEDTPPP SPAAVDAPSA 120 AEDAPLLPDG GVRRRSGSGR FARSGSFRRE VGRAAAETFL LTRLTLILLR YLGIGYRWIR 180 RFLALCCYTF LLMPGFIQVV YYYFFSNQVH RSVVYGDQPR NRLDLYIPTS TAGLKPVVAF 240 VTGGAWIIGY KGWGALLGRR LVERGIIVAC IDYRNFPQGT IGDMVEDASQ GISFVCNNIA 300 SYGGDPNRIY LVGQSAGAHI AACALLNQAI SECGEGDSSS WSVSQIKAYF GISGGYNLLN 360 LVDHFHRRGL YRSIFLSIME GEESLQKFSP QVMIKESSAR SAVSLLPHII LFHGTSDYSI 420 PSAESQAFAD ALQQHGAKAD IFLYEGKTHT DLFIQDPLRG GRDKMLEEIA SVIHSEDPDV 480 SADHLVVPVA RRLVPEFMLK LAGRVSPF* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00312 | Esterase_lipase | 4.0e-9 | 223 | 334 | 133 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
COG1506 | DAP2 | 1.0e-9 | 236 | 449 | 227 | + Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | ||
pfam00135 | COesterase | 4.0e-10 | 223 | 345 | 143 | + Carboxylesterase family. | ||
COG2272 | PnbA | 4.0e-10 | 223 | 326 | 118 | + Carboxylesterase type B [Lipid metabolism] | ||
COG0657 | Aes | 3.0e-23 | 213 | 472 | 268 | + Esterase/lipase [Lipid metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0006508 | proteolysis |
GO:0008152 | metabolic process |
GO:0008236 | serine-type peptidase activity |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG46361.1 | 0 | 90 | 508 | 1 | 418 | carboxylesterase-like protein [Zea mays] |
GenBank | EAZ02309.1 | 0 | 90 | 508 | 1 | 425 | hypothetical protein OsI_24410 [Oryza sativa Indica Group] |
RefSeq | NP_001058531.1 | 0 | 90 | 508 | 1 | 425 | Os06g0708100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002438987.1 | 0 | 15 | 431 | 16 | 434 | hypothetical protein SORBIDRAFT_10g029410 [Sorghum bicolor] |
RefSeq | XP_002514516.1 | 0 | 60 | 508 | 5 | 445 | catalytic, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1jmy_A | 0.00000003 | 209 | 334 | 69 | 221 | A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase |
PDB | 2c7b_B | 0.00000007 | 222 | 472 | 61 | 304 | A Chain A, The Crystal Structure Of Este1, A New Thermophilic And Thermostable Carboxylesterase Cloned From A Metagenomic Library |
PDB | 2c7b_A | 0.00000007 | 222 | 472 | 61 | 304 | A Chain A, The Crystal Structure Of Este1, A New Thermophilic And Thermostable Carboxylesterase Cloned From A Metagenomic Library |
PDB | 1f6w_A | 0.0000001 | 209 | 334 | 69 | 221 | A Chain A, Structure Of The Catalytic Domain Of Human Bile Salt Activated Lipase |
PDB | 2bce_A | 0.0000005 | 214 | 345 | 74 | 231 | A Chain A, Cholesterol Esterase From Bos Taurus |