Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00062572m |
Family | AA1 |
Protein Properties | Length: 562 Molecular Weight: 62400.9 Isoelectric Point: 8.408 |
Chromosome | Chromosome/Scaffold: 002179 Start: 12149 End: 14656 |
Description | SKU5 similar 13 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 49 | 511 | 0 |
QKVILINGEFPGPRINCSSNNNIVINVFNQLDQPLLFTWNGMQHRKNSWMDGLPGTQCPIAPNTNFTYKWQPKDQIGSFFYFPSVGMQRAVGGYGAITVV SRLLIPVPFDQPPPESDHVVLAGDWYTKDHEVLARHLDAGRSIGRPDGVLINGRGGSKDQLAAAPPMFTFEAGKTYRFRVCNTGIKASLNFRIQGHDMKL VEMDGSHTVQDMYDSLDVHVGHCFSVLVDADQKPGDYYLVASTRFIHDARSASAVIRYAGSSAPPSPDVPEPPAGWAWSLNQWRSFRWNLTASAARPNPQ GSYHYGQINITRTIKLMVSRGYVDGKLRYGFNGVSHRDADTPLKLAEYFNATDGVFSYNQMGDAPPAVNGPLHVVPNVITAEFRTFIEIVFENPEKSMDS FHLDGYAFFAVGMGPGKWSPELRKTYNLLDAVSRHTIQVYPRSWSAIMLTFDNAGMWNIRSNL |
Full Sequence |
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Protein Sequence Length: 562 Download |
MSMATTARVA AGVVLALAAL ALQARGEDPY LFFEWKVTYG TKTLLGAPQK VILINGEFPG 60 PRINCSSNNN IVINVFNQLD QPLLFTWNGM QHRKNSWMDG LPGTQCPIAP NTNFTYKWQP 120 KDQIGSFFYF PSVGMQRAVG GYGAITVVSR LLIPVPFDQP PPESDHVVLA GDWYTKDHEV 180 LARHLDAGRS IGRPDGVLIN GRGGSKDQLA AAPPMFTFEA GKTYRFRVCN TGIKASLNFR 240 IQGHDMKLVE MDGSHTVQDM YDSLDVHVGH CFSVLVDADQ KPGDYYLVAS TRFIHDARSA 300 SAVIRYAGSS APPSPDVPEP PAGWAWSLNQ WRSFRWNLTA SAARPNPQGS YHYGQINITR 360 TIKLMVSRGY VDGKLRYGFN GVSHRDADTP LKLAEYFNAT DGVFSYNQMG DAPPAVNGPL 420 HVVPNVITAE FRTFIEIVFE NPEKSMDSFH LDGYAFFAVG MGPGKWSPEL RKTYNLLDAV 480 SRHTIQVYPR SWSAIMLTFD NAGMWNIRSN LWDRHYLGEQ LYMSVMSPAR SLRDEYNMPD 540 NALRCGKVVG LPLPPSYAPA R* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02168 | PLN02168 | 2.0e-174 | 29 | 548 | 532 | + copper ion binding / pectinesterase | ||
PLN02354 | PLN02354 | 0 | 27 | 559 | 533 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 27 | 550 | 525 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 27 | 550 | 524 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 27 | 547 | 523 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF86554.2 | 0 | 3 | 561 | 1 | 559 | unknown [Zea mays] |
GenBank | ACN26659.1 | 0 | 12 | 561 | 13 | 559 | unknown [Zea mays] |
RefSeq | NP_001055876.1 | 0 | 25 | 560 | 26 | 556 | Os05g0485800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151772.1 | 0 | 3 | 561 | 1 | 559 | pollen-specific protein NTP303 [Zea mays] |
RefSeq | NP_001151961.1 | 0 | 12 | 561 | 13 | 559 | pollen-specific protein NTP303 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 33 | 546 | 6 | 539 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 1asq_A | 0 | 33 | 546 | 6 | 539 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 1asp_B | 0 | 33 | 546 | 6 | 539 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 1asp_A | 0 | 33 | 546 | 6 | 539 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 1aso_B | 0 | 33 | 546 | 6 | 539 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |