Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00062614m |
Family | GT8 |
Protein Properties | Length: 706 Molecular Weight: 79062.1 Isoelectric Point: 9.3735 |
Chromosome | Chromosome/Scaffold: 002040 Start: 9466 End: 13298 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 367 | 677 | 0 |
CLTLRLTNEYYFTNSKNKDFPYVEKLEDPKLYHYALFSDNVLAAAVVVNSTLVHAKKPEDHVFHIVTDRLNYAAMKMWFLANPLGKAAIQVQNIEEFTWL NSSYSPVLKQLESQFMIDYYFKSGHARPDENPKFRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDTVVQRDLTALWLVDLKGKVNGAVETCRETFHRFD KYLNFSNPLIAKNFDPHACGWAYGMNIFDLSEWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNERDIRRAAVI HYNGNLKPWLE |
Full Sequence |
---|
Protein Sequence Length: 706 Download |
MAVLRGRRRC RGAVLLLLLA SVLAPLVLYG GSPVSVAHLP DSTAASGAFD REDAPNLVWP 60 QIAASGTSLA RDLTIERPGE HKNRVLSATD HLQAVEAASR SRASGKSDAS VLREEPESRN 120 VDDEDAPVVE GDGNAGLGQG GVIREVVGSE GSAGRFGEPG DGNDAVVRNG KDVGIKLPHS 180 FDAEHKDGSD DGGENIISGM HSTGSLNSSS SQTRDATTSR DNQTRVSNSS SARHTTNRRT 240 GQSTTSPDAT VHIIKDQLTR AKTYLGFFAS RGNHGFAREL RARMRDIQRA LGDATSDRQL 300 PQNVHSKIRA MEQTLVKVKK IHDSCSGAVN RLHTVLHSTE QQLESNKRQA NYLAQVAAKS 360 LPKGLYCLTL RLTNEYYFTN SKNKDFPYVE KLEDPKLYHY ALFSDNVLAA AVVVNSTLVH 420 AKKPEDHVFH IVTDRLNYAA MKMWFLANPL GKAAIQVQNI EEFTWLNSSY SPVLKQLESQ 480 FMIDYYFKSG HARPDENPKF RNPKYLSILN HLRFYLPEIF PKLNKVLFLD DDTVVQRDLT 540 ALWLVDLKGK VNGAVETCRE TFHRFDKYLN FSNPLIAKNF DPHACGWAYG MNIFDLSEWR 600 KQNITEVYHT WQKLNENRLL WKLGTLPAGL VTFWNRTFPL DRSWHQLGLG YNPNVNERDI 660 RRAAVIHYNG NLKPWLEIGL PKYRKYWSTH VDFNQVFLRG CNVNP* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 0 | 212 | 705 | 494 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 212 | 704 | 497 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 246 | 702 | 463 | + Probable galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 221 | 703 | 486 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 298 | 705 | 413 | + galacturonosyltransferase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ19325.1 | 0 | 8 | 705 | 8 | 697 | glycosyl transferase-like protein [Triticum aestivum] |
EMBL | CAJ26362.1 | 0 | 39 | 705 | 38 | 689 | glycosyl transferase-like protein [Brachypodium sylvaticum] |
GenBank | EAZ09508.1 | 0 | 1 | 705 | 2 | 679 | hypothetical protein OsI_31783 [Oryza sativa Indica Group] |
RefSeq | NP_001063487.1 | 0 | 1 | 705 | 2 | 707 | Os09g0480400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002460421.1 | 0 | 35 | 705 | 34 | 705 | hypothetical protein SORBIDRAFT_02g027840 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.0006 | 502 | 675 | 75 | 252 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1g9r_A | 0.0006 | 502 | 675 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0008 | 502 | 675 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |