Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00062685m |
Family | GH35 |
Protein Properties | Length: 748 Molecular Weight: 83257.5 Isoelectric Point: 5.2248 |
Chromosome | Chromosome/Scaffold: 002019 Start: 15457 End: 20852 |
Description | beta-galactosidase 16 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 39 | 335 | 0 |
LVVDGTRRVLFAGEMHYTRSTPEMWPKLIAKAKEGGLDVIQTYVFWNVHEPVQGQYNFEGRYDLVRFIKEIQAQGIYVNLRIGPFIEAEWRYGGFPFWLH DVPDITFRSDNEPFKQHMQRFVTDIVNMMKQERLYYPQGGPIIISQIENEYKMVEPAFGSSGQRYVSWAAAMAVNLQTGVPWTMCKQNDAPDPVVETFVG PNSANKPALWTENWTSRYLIYGNDTKLRSPEDIAFAVAYFLARKNGSYVSYYMYHGGTNFGRSASSYVTTNYYDGAPLDEYGLIWQPTWGHLGELHT |
Full Sequence |
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Protein Sequence Length: 748 Download |
MAAATVLAVL AAVCVPAAAA AAEGGGAERR EVSLDARALV VDGTRRVLFA GEMHYTRSTP 60 EMWPKLIAKA KEGGLDVIQT YVFWNVHEPV QGQYNFEGRY DLVRFIKEIQ AQGIYVNLRI 120 GPFIEAEWRY GGFPFWLHDV PDITFRSDNE PFKQHMQRFV TDIVNMMKQE RLYYPQGGPI 180 IISQIENEYK MVEPAFGSSG QRYVSWAAAM AVNLQTGVPW TMCKQNDAPD PVVETFVGPN 240 SANKPALWTE NWTSRYLIYG NDTKLRSPED IAFAVAYFLA RKNGSYVSYY MYHGGTNFGR 300 SASSYVTTNY YDGAPLDEYG LIWQPTWGHL GELHTAVKQS SEPLLFGTYS NFSLGQEQEH 360 GTRTTEELQS FNDINTWKAF KESIPQDVTK AMHTGDHLFE HLTTTKDETD YLWYIVGYEY 420 TPSDDNQLVL LNVESRAHML HAFVNNEYVG RVHGSHDGPA NIILSANISL KEGPNSISLI 480 SAMVGSPDSG AHMEIRVFGI RKVSIQQGWE PEKILNNELW GYEVGLFGER NRIYTQEGSN 540 NVEWTTINNL TYSSLTWYKT TFSTPAGNDA VVLNLTSMGK GEVWINGESI GRYWVSFKAP 600 SGNPSQSLYH IPRQFLNPQD NVLVLFEEMG GDPQQITVNT VSITRVCGNV NELSAPSLQS 660 QDKEPAVDIS CQEGKQISAI EFASYGNPIG DCASYGIGNC HARSSEWAVK QDCVGRTRCS 720 IPVTPAKFGG DPCPGIQKSL LVVASCR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02140 | Gal_Lectin | 2.0e-18 | 669 | 746 | 81 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 6.0e-19 | 32 | 323 | 349 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN03059 | PLN03059 | 1.0e-82 | 376 | 746 | 406 | + beta-galactosidase; Provisional | ||
pfam01301 | Glyco_hydro_35 | 3.0e-128 | 38 | 337 | 323 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 1.0e-133 | 32 | 359 | 336 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACC64531.1 | 0 | 30 | 747 | 27 | 811 | beta-galactosidase 6 [Oryza sativa Indica Group] |
GenBank | EEC79266.1 | 0 | 30 | 747 | 23 | 761 | hypothetical protein OsI_20049 [Oryza sativa Indica Group] |
GenBank | EEE63798.1 | 0 | 30 | 747 | 27 | 765 | hypothetical protein OsJ_18622 [Oryza sativa Japonica Group] |
Swiss-Prot | Q75HQ3 | 0 | 30 | 747 | 27 | 775 | BGAL7_ORYSJ RecName: Full=Beta-galactosidase 7; Short=Lactase 7; Flags: Precursor |
RefSeq | XP_002441139.1 | 0 | 30 | 747 | 40 | 784 | hypothetical protein SORBIDRAFT_09g021140 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 8e-40 | 38 | 630 | 14 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 2e-31 | 41 | 638 | 12 | 581 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 2e-31 | 41 | 638 | 12 | 581 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8c_B | 2e-31 | 41 | 638 | 12 | 581 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
PDB | 4e8c_A | 2e-31 | 41 | 638 | 12 | 581 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |