| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00062867m |
| Family | GH37 |
| Protein Properties | Length: 591 Molecular Weight: 65771.7 Isoelectric Point: 7.7374 |
| Chromosome | Chromosome/Scaffold: 002030 Start: 279 End: 5098 |
| Description | trehalase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH37 | 65 | 578 | 0 |
| DPKLYVDMPLAADPGAAAAALPPAPSRGEMGAFLRRYLAPAGSDLAAADPPDLALPEPRGFLPRVRSGAARAWARELHALWGNLTRRVAPGVAAARHRHT LLPLPGRAVVPGSGYRELYYWDSYWVVRGLLVSKMYETAKEVVVNLLYLVERYGFVLNGARSYYTNRSQPPLLSSMVLEIYSATGDLDLVKKAFPSLLKE HSFWMSDFHRVMVRDNQGQIHSLTRYQAMWNKPRPESATTDQQMASKLSSEVDKENFYHQVASAAESGWDFSSRWMRNPPDMTTLATTSIIPVDLNTFIY KMERDIEFFAELTGEHIISKEFSDTAKARQIAIDSILWNSEMEQWLDYWLPADVQCQGVYQWNSKSQNRNIFASNFVPIWLNAYHHSGSVKYVNEAKSKG VMRSLKASGLLHMSGIAASLLNTGQQWDFPNGWAPLQHLIVEGLVNCGSAEAREFAEDIASRWVRTNYTAYKASGVMYEKYDVEVCGRSGGSGEYKHQTG FGWSNGVVLSFLEE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 591 Download |
| MDVVARHRRR RQLLLLAVLL LHGLATGAAA PGGGPGGDDD AGALLDLLQR VQSEALRAFG 60 PRGFDPKLYV DMPLAADPGA AAAALPPAPS RGEMGAFLRR YLAPAGSDLA AADPPDLALP 120 EPRGFLPRVR SGAARAWARE LHALWGNLTR RVAPGVAAAR HRHTLLPLPG RAVVPGSGYR 180 ELYYWDSYWV VRGLLVSKMY ETAKEVVVNL LYLVERYGFV LNGARSYYTN RSQPPLLSSM 240 VLEIYSATGD LDLVKKAFPS LLKEHSFWMS DFHRVMVRDN QGQIHSLTRY QAMWNKPRPE 300 SATTDQQMAS KLSSEVDKEN FYHQVASAAE SGWDFSSRWM RNPPDMTTLA TTSIIPVDLN 360 TFIYKMERDI EFFAELTGEH IISKEFSDTA KARQIAIDSI LWNSEMEQWL DYWLPADVQC 420 QGVYQWNSKS QNRNIFASNF VPIWLNAYHH SGSVKYVNEA KSKGVMRSLK ASGLLHMSGI 480 AASLLNTGQQ WDFPNGWAPL QHLIVEGLVN CGSAEAREFA EDIASRWVRT NYTAYKASGV 540 MYEKYDVEVC GRSGGSGEYK HQTGFGWSNG VVLSFLEEFG WPRDKEIVCS * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13270 | treF | 3.0e-76 | 143 | 582 | 455 | + trehalase; Provisional | ||
| PRK13271 | treA | 5.0e-85 | 144 | 577 | 442 | + trehalase; Provisional | ||
| COG1626 | TreA | 2.0e-94 | 144 | 580 | 448 | + Neutral trehalase [Carbohydrate transport and metabolism] | ||
| PLN02567 | PLN02567 | 0 | 49 | 589 | 551 | + alpha,alpha-trehalase | ||
| pfam01204 | Trehalase | 0 | 125 | 580 | 462 | + Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004555 | alpha,alpha-trehalase activity |
| GO:0005991 | trehalose metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABB47896.1 | 0 | 24 | 563 | 1 | 537 | Trehalase family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001065087.1 | 0 | 24 | 589 | 1 | 563 | Os10g0521000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002303674.1 | 0 | 44 | 589 | 23 | 568 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303675.1 | 0 | 44 | 589 | 23 | 568 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002465049.1 | 0 | 25 | 590 | 31 | 579 | hypothetical protein SORBIDRAFT_01g031280 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wyn_D | 0 | 141 | 577 | 89 | 500 | A Chain A, Crystal Structure Of The Phnh Protein From Escherichia Coli |
| PDB | 2wyn_C | 0 | 141 | 577 | 89 | 500 | A Chain A, Crystal Structure Of The Phnh Protein From Escherichia Coli |
| PDB | 2wyn_B | 0 | 141 | 577 | 89 | 500 | A Chain A, Crystal Structure Of The Phnh Protein From Escherichia Coli |
| PDB | 2wyn_A | 0 | 141 | 577 | 89 | 500 | A Chain A, Crystal Structure Of The Phnh Protein From Escherichia Coli |
| PDB | 2jjb_D | 0 | 141 | 577 | 89 | 500 | A Chain A, Crystal Structure Of The Phnh Protein From Escherichia Coli |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose degradation II (trehalase) | TREHALA-RXN | EC-3.2.1.28 | α,α-trehalase |
