| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00062874m |
| Family | GT29 |
| Protein Properties | Length: 479 Molecular Weight: 53921 Isoelectric Point: 8.6839 |
| Chromosome | Chromosome/Scaffold: 001234 Start: 5413 End: 9212 |
| Description | MALE GAMETOPHYTE DEFECTIVE 2 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT29 | 160 | 245 | 3.2e-29 |
| KCYNRTLCDELLSILLPAKPPFHPRQFATCAVVGNSGDLLKKEFGQEIDAHDAVFRDNEAPVNQKYAKHVGLKRDFRLVVRGAARN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 479 Download |
| MTRAHLLPAA SQRRPTVALL LGLALAFCLA VLSIQSSFFA APGAPGRRLD LDAGDVRELA 60 GFQSRVQQCV ASRGLGLTAD IIDHCKLVLK FPEGTNSTWY NTQFKIFEPL EYKYDVCEAI 120 LLWEQYRNMT TVLTREYLDV RPDGWLDYAA KRIAQLGADK CYNRTLCDEL LSILLPAKPP 180 FHPRQFATCA VVGNSGDLLK KEFGQEIDAH DAVFRDNEAP VNQKYAKHVG LKRDFRLVVR 240 GAARNMAPIL KGSSDEALII KSLTHKEINA VIKELPNPVY LFQGIVLRRG AKGTGMKSIE 300 LALSMCDIID MYGFTVDPGY TEWTRYFSAP RKGHNPLQGR AYYQLLECLG VIRIHSPMRA 360 QRVEDWSDIP SKEEIRRAHA AAFRLKKHET GQPAELGPFS NCKVWGTVDP DYGPVSGTSD 420 MSELRKNSNY RKWELLPLEK LRREAQEHYI QMDGVSLYKM DGNKLDDLVC VRHQRSSS* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00777 | Glyco_transf_29 | 9.0e-48 | 146 | 358 | 264 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008373 | sialyltransferase activity |
| GO:0030173 | integral to Golgi membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF82979.1 | 0 | 1 | 478 | 1 | 477 | unknown [Zea mays] |
| EMBL | CAJ44462.1 | 0 | 1 | 478 | 1 | 481 | sialyltransferase like protein [Sorghum bicolor] |
| RefSeq | NP_001068125.1 | 0 | 35 | 478 | 38 | 480 | Os11g0572400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105844.1 | 0 | 1 | 478 | 1 | 477 | sialyltransferase like protein [Zea mays] |
| RefSeq | XP_002449728.1 | 0 | 1 | 478 | 1 | 481 | hypothetical protein SORBIDRAFT_05g022210 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wnf_A | 0.00000000003 | 189 | 339 | 100 | 266 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 2wnb_A | 0.00000000003 | 189 | 339 | 100 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
| PDB | 2wml_A | 0.00000000003 | 189 | 339 | 100 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
