| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00062875m |
| Family | GT29 |
| Protein Properties | Length: 351 Molecular Weight: 39693.5 Isoelectric Point: 8.9361 |
| Chromosome | Chromosome/Scaffold: 001234 Start: 6175 End: 8864 |
| Description | MALE GAMETOPHYTE DEFECTIVE 2 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT29 | 32 | 117 | 1.8e-29 |
| KCYNRTLCDELLSILLPAKPPFHPRQFATCAVVGNSGDLLKKEFGQEIDAHDAVFRDNEAPVNQKYAKHVGLKRDFRLVVRGAARN | |||
| Full Sequence |
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| Protein Sequence Length: 351 Download |
| MTTVLTREYL DVRPDGWLDY AAKRIAQLGA DKCYNRTLCD ELLSILLPAK PPFHPRQFAT 60 CAVVGNSGDL LKKEFGQEID AHDAVFRDNE APVNQKYAKH VGLKRDFRLV VRGAARNMAP 120 ILKGSSDEAL IIKSLTHKEI NAVIKELPNP VYLFQGIVLR RGAKGTGMKS IELALSMCDI 180 IDMYGFTVDP GYTEWTRYFS APRKGHNPLQ GRAYYQLLEC LGVIRIHSPM RAQRVEDWSD 240 IPSKEEIRRA HAAAFRLKKH ETGQPAELGP FSNCKVWGTV DPDYGPVSGT SDMSELRKNS 300 NYRKWELLPL EKLRREAQEH YIQMDGVSLY KMDGNKLDDL VCVRHQRSSS * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00777 | Glyco_transf_29 | 1.0e-48 | 18 | 230 | 264 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008373 | sialyltransferase activity |
| GO:0030173 | integral to Golgi membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF82979.1 | 0 | 1 | 350 | 128 | 477 | unknown [Zea mays] |
| GenBank | ACR34246.1 | 0 | 1 | 350 | 38 | 387 | unknown [Zea mays] |
| EMBL | CAJ44462.1 | 0 | 1 | 350 | 132 | 481 | sialyltransferase like protein [Sorghum bicolor] |
| RefSeq | NP_001105844.1 | 0 | 1 | 350 | 128 | 477 | sialyltransferase like protein [Zea mays] |
| RefSeq | XP_002449728.1 | 0 | 1 | 350 | 132 | 481 | hypothetical protein SORBIDRAFT_05g022210 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wnf_A | 0.00000000002 | 61 | 211 | 100 | 266 | A Chain A, Crystal Structure Of A Probable Mutt1 Protein From Bifidobacterium Adolescentis |
| PDB | 2wnb_A | 0.00000000002 | 61 | 211 | 100 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
| PDB | 2wml_A | 0.00000000002 | 61 | 211 | 100 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| JG915681 | 269 | 33 | 301 | 0 |
| EG388498 | 252 | 62 | 313 | 0 |
| DR914797 | 283 | 1 | 283 | 0 |
| EY715171 | 290 | 55 | 343 | 0 |
| GE609557 | 257 | 1 | 257 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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