y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00062958m |
Family | GH17 |
Protein Properties | Length: 567 Molecular Weight: 61815.1 Isoelectric Point: 9.5776 |
Chromosome | Chromosome/Scaffold: 001174 Start: 16783 End: 20501 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 204 | 515 | 0 |
GINYGRIADNLPAPEDVVRLLKLARIRNVKIYDAEHKVLDAFRGSGLNLVVAIPNEFLKDMAANPSKAMDWLNENVQPYYPATRIVGITVGNEVLGGGDA GLAEALVGAVANVHDALRMLRLDRRIELSTPHSEGVFANSYPPSACVFRDDLMVYLRPLLDFFSKTGAPFYVNAYPFLAYMSDPSHIDINYALFKPNAGI VDPKTGLHYDNMFEAQLDAAYFALEAAGYPGMEVRVAETGWASAGDATEAGAGLANAITYNRNLRKRLFLRKGTPYRPGRVAKAYIFALFNENLKPGPTT ERHYGLFKPDGS |
Full Sequence |
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Protein Sequence Length: 567 Download |
MVVAICFCLA GAQGKRRGGK IGNMYTTAEF LSSTRSLLRD AAMSMKIRFV VLGGPRNPGV 60 DATTAARHEL RSRLPFTAVH RTVHRPQHLH GSSPSTLGAR VPAIQRPSER SHRTVDNSLI 120 TSKIDSSPCR WETAAVMAPR WKSGDGRRRL LLLLCCSLLA FPCHCQVTNV SHRSDQGSLI 180 DRSIESSDAD EQMIGIHSFV GTYGINYGRI ADNLPAPEDV VRLLKLARIR NVKIYDAEHK 240 VLDAFRGSGL NLVVAIPNEF LKDMAANPSK AMDWLNENVQ PYYPATRIVG ITVGNEVLGG 300 GDAGLAEALV GAVANVHDAL RMLRLDRRIE LSTPHSEGVF ANSYPPSACV FRDDLMVYLR 360 PLLDFFSKTG APFYVNAYPF LAYMSDPSHI DINYALFKPN AGIVDPKTGL HYDNMFEAQL 420 DAAYFALEAA GYPGMEVRVA ETGWASAGDA TEAGAGLANA ITYNRNLRKR LFLRKGTPYR 480 PGRVAKAYIF ALFNENLKPG PTTERHYGLF KPDGSVSINI GLKGLVPSSA PPPPSSPMAL 540 FKARGWIVRY SAALLPCTLI FLALAT* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 3.0e-89 | 204 | 515 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN32059.1 | 0 | 139 | 564 | 4 | 415 | unknown [Zea mays] |
DDBJ | BAD15845.1 | 0 | 196 | 565 | 52 | 424 | putative beta-1,3-glucanase [Oryza sativa Japonica Group] |
GenBank | EEC72694.1 | 0 | 196 | 565 | 52 | 424 | hypothetical protein OsI_06270 [Oryza sativa Indica Group] |
GenBank | EEE56513.1 | 0 | 196 | 565 | 52 | 424 | hypothetical protein OsJ_05789 [Oryza sativa Japonica Group] |
RefSeq | XP_002453496.1 | 0 | 139 | 566 | 4 | 403 | hypothetical protein SORBIDRAFT_04g006850 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 204 | 522 | 3 | 315 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3f55_C | 0 | 204 | 522 | 3 | 315 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3f55_B | 0 | 204 | 522 | 3 | 315 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3f55_A | 0 | 204 | 522 | 3 | 315 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3em5_D | 0 | 204 | 522 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |