Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00063103m |
Family | GH35 |
Protein Properties | Length: 332 Molecular Weight: 37155.2 Isoelectric Point: 5.595 |
Chromosome | Chromosome/Scaffold: 002042 Start: 790 End: 3113 |
Description | beta-galactosidase 10 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 325 | 0 |
LIIDGRRRLVISTSIHYPRSVPEMWPKLVAEAKDGGADCIETYVFWNGHEIAPGQYYFEDRFDLVRFVKVVRDAGLLLILRIGPFVAAEWNFGGVPVWLH YVPGTVFRTNNEPFKSHMQSFTTYIVNMMKKEQLFASQGGNIILAQIENEYGGYLEQYYGTAGKAYAMWAASMALAQNTGVPWIMCQQPDAPDPVINTCN SFYCDNFQPNSPTKPKFWTENWPGWFQTFGESNPHRPPEDVAFAVARFFEKGGSVQNYYVYHGGTNFGRTTGGPFITTSYDYDAPIDEYG |
Full Sequence |
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Protein Sequence Length: 332 Download |
MAAAAASFAA LPCLLLLLLL PSFGAASNVT YDHRSLIIDG RRRLVISTSI HYPRSVPEMW 60 PKLVAEAKDG GADCIETYVF WNGHEIAPGQ YYFEDRFDLV RFVKVVRDAG LLLILRIGPF 120 VAAEWNFGGV PVWLHYVPGT VFRTNNEPFK SHMQSFTTYI VNMMKKEQLF ASQGGNIILA 180 QIENEYGGYL EQYYGTAGKA YAMWAASMAL AQNTGVPWIM CQQPDAPDPV INTCNSFYCD 240 NFQPNSPTKP KFWTENWPGW FQTFGESNPH RPPEDVAFAV ARFFEKGGSV QNYYVYHGGT 300 NFGRTTGGPF ITTSYDYDAP IDEYGFALLQ L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 5.0e-15 | 29 | 189 | 168 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 5.0e-138 | 35 | 325 | 305 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 1.0e-152 | 27 | 326 | 300 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAG95687.1 | 0 | 25 | 329 | 102 | 405 | unnamed protein product [Oryza sativa Japonica Group] |
GenBank | EEC71891.1 | 0 | 27 | 329 | 36 | 337 | hypothetical protein OsI_04635 [Oryza sativa Indica Group] |
RefSeq | NP_001044964.1 | 0 | 25 | 329 | 34 | 337 | Os01g0875500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151478.1 | 0 | 22 | 326 | 22 | 326 | beta-galactosidase [Zea mays] |
RefSeq | XP_002456725.1 | 0 | 22 | 326 | 22 | 326 | hypothetical protein SORBIDRAFT_03g041450 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 4e-39 | 35 | 325 | 14 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 1e-37 | 38 | 325 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 1e-37 | 38 | 325 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8c_B | 1e-37 | 38 | 325 | 12 | 313 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
PDB | 4e8c_A | 1e-37 | 38 | 325 | 12 | 313 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |