| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00063105m |
| Family | GH35 |
| Protein Properties | Length: 785 Molecular Weight: 87674 Isoelectric Point: 8.863 |
| Chromosome | Chromosome/Scaffold: 002042 Start: 7528 End: 14413 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 53 | 342 | 0 |
| LILDGARRMLFSGDMHYPRSTPEMWPDLIAKAKKGGLDVIQTYVFWNAHEPVQGQYNFKGRYDLVKFIREIHAQGLYVSLRLGPFVESEWKYGGLPFWLR GIPNITFRCDNEAFKRHMQKFVTKIVNLMKDERLFYPQGGPIIISQIENEYKLVEAAFHSKGPPYVHWAAAMAVNLQTGVPWMMCKQDDAPDPIINTCNG LICGETFLGPNSPNKPALWTENWTSRYPVYGQDRRYRSAADLAFAVALFIVRKKGSFVNYYMYHGGTNFGRFASSYVTTSYYDGAPLDEY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 785 Download |
| MTGAGGATVA AVVVLAALAA LAAAGTGRAR GADEERGNRT AGRREVTYDG RALILDGARR 60 MLFSGDMHYP RSTPEMWPDL IAKAKKGGLD VIQTYVFWNA HEPVQGQYNF KGRYDLVKFI 120 REIHAQGLYV SLRLGPFVES EWKYGGLPFW LRGIPNITFR CDNEAFKRHM QKFVTKIVNL 180 MKDERLFYPQ GGPIIISQIE NEYKLVEAAF HSKGPPYVHW AAAMAVNLQT GVPWMMCKQD 240 DAPDPIINTC NGLICGETFL GPNSPNKPAL WTENWTSRYP VYGQDRRYRS AADLAFAVAL 300 FIVRKKGSFV NYYMYHGGTN FGRFASSYVT TSYYDGAPLD EYESECVAFL VNFDKHKIST 360 IQFGEEVFQL APKSISILSQ CRELIFQTGK INAQHGLRTA QVVQSINHVD RWKCFKEPIP 420 TVPSKMSHVG NQLYEHLSTT KDETDYLWYL AAHNYKQNGN GQLVLNVEAQ AHILHAFINN 480 DYIGSVHGSH DKPGNIVLKV PISLREGRNS ISLLCVMVGS PDSGAYMERR TFGVRRVSIK 540 RRQQKPHSMN IVHWKNQVGL SGETNKIYTS EGSARAEWSA IDKSMHLPLI WYKTTFDTPW 600 GNDPVTLNLS SMGKGEVWIN GESIGRYWVS FKTPSGQPSQ SLYHIPRYFL KTGENLLVLM 660 EEIGGNPLQI TVNTMSVTRI YSSVSELSTP SVLSREKHPA IHLRCQKGKH ITDIEFASYG 720 NSHEDCIESG QNCHGSCHAE ISEFVVKNAC LGRRKCVVSV RAPKFGGDPC PGIEKSLSVV 780 AICG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 7.0e-6 | 68 | 212 | 160 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 5.0e-15 | 703 | 783 | 87 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 2.0e-21 | 46 | 328 | 331 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-132 | 52 | 342 | 305 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 46 | 783 | 824 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACC64531.1 | 0 | 44 | 783 | 27 | 810 | beta-galactosidase 6 [Oryza sativa Indica Group] |
| GenBank | EEC79266.1 | 0 | 44 | 783 | 23 | 760 | hypothetical protein OsI_20049 [Oryza sativa Indica Group] |
| GenBank | EEE63798.1 | 0 | 44 | 783 | 27 | 764 | hypothetical protein OsJ_18622 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q75HQ3 | 0 | 44 | 783 | 27 | 774 | BGAL7_ORYSJ RecName: Full=Beta-galactosidase 7; Short=Lactase 7; Flags: Precursor |
| RefSeq | XP_002441139.1 | 0 | 30 | 783 | 30 | 783 | hypothetical protein SORBIDRAFT_09g021140 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1.00053e-42 | 52 | 664 | 14 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 1e-33 | 38 | 661 | 3 | 597 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 1e-33 | 38 | 661 | 3 | 597 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 1e-33 | 38 | 661 | 3 | 597 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_A | 1e-33 | 38 | 661 | 3 | 597 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
