| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00063124m |
| Family | GT31 |
| Protein Properties | Length: 648 Molecular Weight: 71835.8 Isoelectric Point: 8.4381 |
| Chromosome | Chromosome/Scaffold: 001604 Start: 3453 End: 6657 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT31 | 415 | 598 | 0 |
| ERMAVRKSWMISTRRSSNVVARFFVALNGKKEVNEELKREAEYFGDIVIVPFMDNYDLVVLKTISIVEYGVRVVPAKHIMKCDDDTFVRIESVLDQVKKV QSGKSMYVGNINYYHRPLRSGKWSVTYEEWPEQVYPPYANGPGYVISSDIAQYILSEFDNKALRLFKMEDVSMGMWVEKFNTTR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 648 Download |
| MPPKRACRLA LLAAAAAYLL FLLLFELPSF SVSTAAPRGG DAAATPTHRA RRRELEAAAA 60 SGLRSPSPLR PHKSAFPRRA PLAVSSVRFH RPNSSSSFDV SASAAFTAAR PRLAHLLSYS 120 DYASPSSSSP SPSPSTAAPA SSCPATVSAP GDRLASGGAG AVAVELPCGM AVGSRVTVVA 180 RPRAARAEGE PRIAERREGG APVMVSQFMV ELLGTKAVQG EEPPRVLHFN PRIRGDFSGR 240 PVIELNTCYR MQWAQPQRCE GFASRPDEDT VDGELKCEKW IRDDYSSSEE SKMKSWLSRL 300 IGRPGIDWPY PFAEGKQFVL TIIAGLEGYH VNVDGRHITS FPYRTGYNLE DATELSLKGD 360 LDVESVFVAH LPSSPPSFSP QSYLEMSEQW KASPLPTEPV ELFIGILSAA NHFSERMAVR 420 KSWMISTRRS SNVVARFFVA LNGKKEVNEE LKREAEYFGD IVIVPFMDNY DLVVLKTISI 480 VEYGVRVVPA KHIMKCDDDT FVRIESVLDQ VKKVQSGKSM YVGNINYYHR PLRSGKWSVT 540 YEEWPEQVYP PYANGPGYVI SSDIAQYILS EFDNKALRLF KMEDVSMGMW VEKFNTTRQP 600 VEYLHDVRFY QPGCFDGYFT AHYQSPQHMI CLWRKLQAGS AQCCNVR* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 6.0e-16 | 167 | 366 | 200 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 1.0e-17 | 162 | 367 | 206 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 1.0e-21 | 164 | 366 | 203 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| pfam01762 | Galactosyl_T | 4.0e-28 | 416 | 593 | 188 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 2.0e-115 | 158 | 647 | 504 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO72371.1 | 0 | 2 | 647 | 3 | 651 | putative galactosyltransferase [Oryza sativa Japonica Group] |
| GenBank | ABF99414.1 | 0 | 2 | 647 | 3 | 651 | galactosyltransferase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEE60126.1 | 0 | 2 | 647 | 3 | 652 | hypothetical protein OsJ_13004 [Oryza sativa Japonica Group] |
| RefSeq | NP_001051611.1 | 0 | 2 | 647 | 3 | 677 | Os03g0803600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463710.1 | 0 | 1 | 647 | 1 | 638 | hypothetical protein SORBIDRAFT_01g004660 [Sorghum bicolor] |
