| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00063126m |
| Family | GT31 |
| Protein Properties | Length: 642 Molecular Weight: 72227.4 Isoelectric Point: 6.9439 |
| Chromosome | Chromosome/Scaffold: 001604 Start: 20778 End: 25040 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT31 | 410 | 591 | 0 |
| ERMAARKTWMSAAQKSSNVVARFFVALHGRNEINVELKKEAEFFGDIVIVPFMDSYDLVVLKTIAICKYGVHVVSARYIMKCDDDTFVRLELVMAEVKKI RNGESLYIGNMNYHHKPLRDGKWAVTYEEWPEEDYPIYANGPGYVISSDIADAVLSEFLNHKLRLFKMEDVSMGMWVERFNS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 642 Download |
| MRRPPGAGAP CRRRAIQGFV ALFLAYALFV LLLESPLVST SLPGAGASAG VAEAPPRRRH 60 PHRETLSADG GRGRARWLSG FVSGLELRHL NSTRSGSLRK VAAEAAESGA RVFADLQTLA 120 TNLTSSRDSP DEEQRNKCPH SIVLSGDEFR ERGRTVELPC GLTLGSYITV AATPHEAHPE 180 RDPKITLLKE GEEPIMVSQF MMELQGLKTV DGEDPPRILH FNPRLRGDWS GKPVIEQNTC 240 YRMQWGTPLR CEGWRSRADE ETVDGLVKCE KWIRDDEGRS EESKTSWWLN RLIGRTKTVS 300 IDWPYPFVED HLFVLTLTAG LEGYHVNVDG RHVTSFPYRT GFVLEDATGL SLNGDLDVQS 360 VFAGSLPTTH PSFSPQKHLE MLPSWQAPPL PDEPVEIFIG ILSAGNHFAE RMAARKTWMS 420 AAQKSSNVVA RFFVALHGRN EINVELKKEA EFFGDIVIVP FMDSYDLVVL KTIAICKYGV 480 HVVSARYIMK CDDDTFVRLE LVMAEVKKIR NGESLYIGNM NYHHKPLRDG KWAVTYEEWP 540 EEDYPIYANG PGYVISSDIA DAVLSEFLNH KLRLFKMEDV SMGMWVERFN STRPVKYVHS 600 IKFCQFGCID DYYTAHYQSP RQMLCLWDKL LAGKAQCCNM R* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 6.0e-14 | 159 | 361 | 203 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 4.0e-17 | 155 | 362 | 208 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 1.0e-20 | 154 | 361 | 208 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| pfam01762 | Galactosyl_T | 6.0e-27 | 409 | 588 | 192 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 4.0e-130 | 121 | 641 | 539 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS07235.1 | 0 | 1 | 573 | 1 | 587 | putative galactosyltransferase, 3'-partial [Oryza sativa Japonica Group] |
| GenBank | EAY92235.1 | 0 | 1 | 641 | 1 | 655 | hypothetical protein OsI_13955 [Oryza sativa Indica Group] |
| RefSeq | NP_001051614.1 | 0 | 1 | 641 | 1 | 655 | Os03g0803900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001059116.1 | 0 | 47 | 641 | 68 | 663 | Os07g0195200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463707.1 | 0 | 1 | 641 | 1 | 656 | hypothetical protein SORBIDRAFT_01g004630 [Sorghum bicolor] |
