CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00063183m
FamilyGT2
Protein PropertiesLength: 352 Molecular Weight: 39072.9 Isoelectric Point: 9.9678
ChromosomeChromosome/Scaffold: 001872 Start: 10292 End: 12701
DescriptionNucleotide-diphospho-sugar transferases superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT2862811.1e-33
  SLIVPAYNEEHRLPEALTETLNYLKQRSAADKSFSYEVLIVDDGSTDQTSKVAFKFVKQHKIGNVRVLLLGRNHGKGEAVRKGMLHSRGELLLMLDADGA
  TKVTDLEKLEAQVHALAQKVKSTPGTSSSSPQKASDVEIAVFGSRAHLEKQALATRKWYRNFLMKGFHLVVLLTAGPGIRDTQCGFKMFTRAAARK
Full Sequence
Protein Sequence     Length: 352     Download
MVAAVWPLSA VAGLIPGSLS LTLLIATLVS ILVLGAAAVF FEHIRKIGCM HSLERSAISN    60
AFFEDPNSLN KVPCPSIFDP PEKYISLIVP AYNEEHRLPE ALTETLNYLK QRSAADKSFS    120
YEVLIVDDGS TDQTSKVAFK FVKQHKIGNV RVLLLGRNHG KGEAVRKGML HSRGELLLML    180
DADGATKVTD LEKLEAQVHA LAQKVKSTPG TSSSSPQKAS DVEIAVFGSR AHLEKQALAT    240
RKWYRNFLMK GFHLVVLLTA GPGIRDTQCG FKMFTRAAAR KLFTNIRLKR WCFDVELVYL    300
CKHLRIPMVE VSVYWTEIPG SKVRMTSIMH MVFELLLIKV GYGLGIWKIY T*            360
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06442DPM1_like3.0e-2187311225+
pfam00535Glycos_transf_26.0e-2486283198+
cd04179DPM_DPG-synthase_like1.0e-5187301215+
PTZ00260PTZ002606.0e-10028349326+
cd04188DPG_synthase5.0e-10487322236+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAO18453.104235171380putative dolichyl-phosphate beta-glucosyltransferase [Oryza sativa Japonica Group]
GenBankEEC76428.1013511352hypothetical protein OsI_14108 [Oryza sativa Indica Group]
RefSeqNP_001051729.1013511352Os03g0821800 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001140935.104234941348hypothetical protein LOC100273013 [Zea mays]
RefSeqXP_002312095.105934942333predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3l7l_D0.0000685184494A Chain A, Raphanus Sativus Anionic Peroxidase.
PDB3l7l_C0.0000685184494A Chain A, Raphanus Sativus Anionic Peroxidase.
PDB3l7l_B0.0000685184494A Chain A, Raphanus Sativus Anionic Peroxidase.
PDB3l7l_A0.0000685184494A Chain A, Raphanus Sativus Anionic Peroxidase.
PDB3l7k_D0.0000685184494A Chain A, Raphanus Sativus Anionic Peroxidase.
Metabolic Pathways
Pathway NameReactionECProtein Name
dolichyl-diphosphooligosaccharide biosynthesis2.4.1.117-RXNEC-2.4.1.117dolichyl-phosphate β-glucosyltransferase
Transmembrane Domains
StartEnd
1941
247264
328350
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
JG875400261923520
FE61723324312430
HO335835240953340
HO323954235642980
DR79162226722680
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_011_00165.2Aquca_011_00165.3Aquca_011_00165.4Aquca_011_00165.1
Arabidopsis lyrata482983
Arabidopsis thalianaAT2G39630.2AT2G39630.1
Brachypodium distachyonBradi1g03660.1
Brassica rapaBra005029Bra000139
Carica papayaevm.model.supercontig_1.403
Capsella rubellaCarubv10023563m
Chlamydomonas reinhardtiiCre16.g652850.t1.2
Citrus clementinaCiclev10032053m
Citrus sinensisorange1.1g027065morange1.1g019818morange1.1g023346m
Cucumis sativusCucsa.010820.1Cucsa.165370.1Cucsa.165370.2Cucsa.165370.3
Eucalyptus grandisEucgr.G02933.1Eucgr.G02933.2Eucgr.G02933.3
Fragaria vescamrna26609.1-v1.0-hybrid
Glycine maxGlyma02g10150.1Glyma18g52810.2Glyma18g52810.1Glyma02g10150.3Glyma02g10150.2
Gossypium raimondiiGorai.011G260700.2Gorai.009G319400.2Gorai.009G319400.4Gorai.011G260700.3Gorai.011G260700.1
Gorai.009G319400.1Gorai.009G319400.3
Linum usitatissimumLus10005164Lus10001691Lus10023414Lus10040296
Malus domesticaMDP0000274007MDP0000272852
Manihot esculentacassava4.1_011328m
Medicago truncatulaMedtr7g026260.2Medtr7g026260.1
Mimulus guttatusmgv1a025143m
Oryza sativaLOC_Os03g60700.1LOC_Os03g60700.2
Panicum virgatumPavirv00060983m
Physcomitrella patensPp1s49_46V6.1Pp1s14_205V6.2Pp1s14_205V6.1Pp1s96_201V6.1
Phaseolus vulgarisPhvul.008G010800.1Phvul.008G010800.2
Picea abiesMA_10347707g0010MA_10428813g0010MA_159008g0490MA_158860g0090
Populus trichocarpaPotri.010G204000.4Potri.010G204000.2Potri.010G204000.1Potri.008G055700.1Potri.010G204000.3
Potri.008G055700.2
Prunus persicappa008313m
Ricinus communis30003.m000334
Setaria italicaSi036396m
Selaginella moellendorffii73379414988101926
Sorghum bicolorSb01g003140.1
Thellungiella halophilaThhalv10016901m
Vitis viniferaGSVIVT01016551001
Volvox carteriVocar20012273m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny