Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00063187m |
Family | GT41 |
Protein Properties | Length: 1010 Molecular Weight: 113191 Isoelectric Point: 6.5859 |
Chromosome | Chromosome/Scaffold: 002027 Start: 2950 End: 12884 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT41 | 616 | 777 | 0 |
KAEGKHCRLRVGYVSSDFGNHPLSHLMGSVFGMHDRDNIEVFCYALSQNDGTEWRQRIQSEAEHFVDVSAMTSDMIARLINQDKIQILINLNGYTKGARN EIFALQPAPIQVSYMGFPGTTGAAYIDYLVTDEFVSPSCYAHIYSEKLVHLPHCYFVNDYKQ | |||
GT41 | 788 | 989 | 0 |
PHKRSDYGLPEDKFIFACFNQLYKMDPEIFDTWCNILKRVPNSALWLLRFPAAGETRVRSHAAARGVRPDQIIFTDVAMKNEHIRRSQLADLFLDTPLCN AHTTGTDILWAGLPMITLPLEKMATRVAGSLCVATGLGEEMIVSSMKEYEDRAVELALNPAKLQSLTNKLKEVRMSCPLFDTARWVRNLERAYYKMWNLY CS |
Full Sequence |
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Protein Sequence Length: 1010 Download |
MLSLQQQQQH GGAVAVGDAR HHAPQPAVLG GGGGDWLGFV GRADLEEPAR NAPSPATFLL 60 PPAPLDDRAA QPEPKPGQLA GAVDEQRHLA LAHQNYRSGK YREALEHGNV VYEKNPRRTD 120 NLLLLGAIYY QIRNYDMCIA KNEEALAIDP HFAECYGNMA NAWKEKGDID LAIRYYLTAI 180 QLRPNFCDAW SNLASAYTRK GRLNEAAQCC RQALAINPRL VDAHSNLGNL MKAQGFIQDA 240 YSCYIEALRI DPHFAIAWSN LAGLFMEAGD LDKALMYYKE AVKLKPSFAD AYLNQGNVYK 300 ALGMPQDAIV CYQRALQARP DYAMAYGNLA TIYYEQGQLD MAIRCYNQAI VCDPQFVEAY 360 NNMGNALKDA GRVEEAINCY RSCLALQANH PQALTNLGNI YMEWNLISAA ASFYKAAISV 420 TSGLSSPLNN LAVIYKQQGN YADAITCYTE VLRIDPTAAD ALVNRGNTFK EIGRVNEAIQ 480 DYIQAARIRP NMAEAHANLA SAYKDSGHVE TAIISYKQAL QLRPDFPEAT CNLLHTLQCV 540 CDWENRDAMF RDVEEIIRRQ IKMSVLPSVQ PFHAIAYPID PMLALEISRK YAAHCSLIAS 600 RFGLPPFVHP PPVPVKAEGK HCRLRVGYVS SDFGNHPLSH LMGSVFGMHD RDNIEVFCYA 660 LSQNDGTEWR QRIQSEAEHF VDVSAMTSDM IARLINQDKI QILINLNGYT KGARNEIFAL 720 QPAPIQVSYM GFPGTTGAAY IDYLVTDEFV SPSCYAHIYS EKLVHLPHCY FVNDYKQKNQ 780 DCLTPVCPHK RSDYGLPEDK FIFACFNQLY KMDPEIFDTW CNILKRVPNS ALWLLRFPAA 840 GETRVRSHAA ARGVRPDQII FTDVAMKNEH IRRSQLADLF LDTPLCNAHT TGTDILWAGL 900 PMITLPLEKM ATRVAGSLCV ATGLGEEMIV SSMKEYEDRA VELALNPAKL QSLTNKLKEV 960 RMSCPLFDTA RWVRNLERAY YKMWNLYCSG RHPEPFKVEE DDKEFPFDR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13844 | Glyco_transf_41 | 8.0e-71 | 624 | 777 | 155 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
pfam13844 | Glyco_transf_41 | 1.0e-75 | 791 | 984 | 194 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
COG3914 | Spy | 3.0e-106 | 429 | 987 | 568 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN26645.1 | 0 | 1 | 1009 | 1 | 1009 | unknown [Zea mays] |
DDBJ | BAD21873.1 | 0 | 1 | 1009 | 1 | 953 | putative O-linked N-acetyl glucosamine transferase [Oryza sativa Japonica Group] |
GenBank | EEC73199.1 | 0 | 1 | 1009 | 1 | 1004 | hypothetical protein OsI_07263 [Oryza sativa Indica Group] |
GenBank | EEE57013.1 | 0 | 1 | 1009 | 1 | 1004 | hypothetical protein OsJ_06783 [Oryza sativa Japonica Group] |
RefSeq | XP_002453843.1 | 0 | 1 | 1009 | 1 | 1011 | hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4gz6_D | 0 | 390 | 775 | 8 | 390 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 4gz6_D | 0 | 772 | 994 | 495 | 716 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 4gz6_D | 3e-29 | 218 | 368 | 6 | 156 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 4gz6_D | 3e-28 | 150 | 294 | 6 | 150 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 4gz6_D | 8e-25 | 184 | 330 | 6 | 152 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795247 | 461 | 550 | 1010 | 0 |
HO778725 | 450 | 561 | 1010 | 0 |
HO798232 | 419 | 74 | 492 | 0 |
HO798232 | 367 | 158 | 524 | 0 |
HO795247 | 54 | 498 | 551 | 9e-17 |
Sequence Alignments (This image is cropped. Click for full image.) |
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