| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00063200m |
| Family | CE16 |
| Protein Properties | Length: 198 Molecular Weight: 22282.6 Isoelectric Point: 8.9561 |
| Chromosome | Chromosome/Scaffold: 001175 Start: 26117 End: 27280 |
| Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE16 | 20 | 174 | 1.4e-21 |
| EYNGDQYSTLLVQQYAKQLNTLYGLGARRFVIAGVGSMACIPNMRARSPLNVCSPDVDDLIIPFNNKVKAMVNSLNANRPNAKFIYVDNYAMISEILRNP WSYGFSVVDRGCCGIGRNRGMITCLPFLRPCLNRNTYIFWDAFHPTERVNVLLGR | |||
| Full Sequence |
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| Protein Sequence Length: 198 Download |
| MGSNDYLNNY LMPNYNTRNE YNGDQYSTLL VQQYAKQLNT LYGLGARRFV IAGVGSMACI 60 PNMRARSPLN VCSPDVDDLI IPFNNKVKAM VNSLNANRPN AKFIYVDNYA MISEILRNPW 120 SYGFSVVDRG CCGIGRNRGM ITCLPFLRPC LNRNTYIFWD AFHPTERVNV LLGRAAFNGG 180 TDVVYPMNIQ QLAAWQP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00657 | Lipase_GDSL | 7.0e-8 | 1 | 175 | 178 | + GDSL-like Lipase/Acylhydrolase. | ||
| COG3240 | COG3240 | 2.0e-8 | 2 | 173 | 173 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
| cd01846 | fatty_acyltransferase_like | 1.0e-26 | 1 | 178 | 178 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
| PLN03156 | PLN03156 | 1.0e-30 | 1 | 169 | 175 | + GDSL esterase/lipase; Provisional | ||
| cd01837 | SGNH_plant_lipase_like | 6.0e-60 | 1 | 179 | 182 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006629 | lipid metabolic process |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY98084.1 | 0 | 1 | 197 | 229 | 425 | hypothetical protein OsI_20002 [Oryza sativa Indica Group] |
| RefSeq | NP_001055574.1 | 0 | 1 | 197 | 197 | 393 | Os05g0419800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147753.1 | 0 | 1 | 197 | 195 | 391 | anther-specific proline-rich protein APG [Zea mays] |
| RefSeq | NP_001150393.1 | 0 | 1 | 197 | 193 | 389 | anther-specific proline-rich protein APG [Zea mays] |
| RefSeq | XP_002439816.1 | 0 | 1 | 197 | 190 | 386 | hypothetical protein SORBIDRAFT_09g020670 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| triacylglycerol degradation | TRIACYLGLYCEROL-LIPASE-RXN | EC-3.1.1.3 | triacylglycerol lipase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FL810886 | 198 | 1 | 198 | 0 |
| FE653784 | 196 | 1 | 196 | 0 |
| CA247979 | 198 | 1 | 198 | 0 |
| DR786318 | 198 | 1 | 198 | 0 |
| CA247978 | 195 | 1 | 195 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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