Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00063237m |
Family | GT14 |
Protein Properties | Length: 408 Molecular Weight: 45909.2 Isoelectric Point: 6.8462 |
Chromosome | Chromosome/Scaffold: 001300 Start: 20380 End: 25971 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 61 | 315 | 0 |
FAYWISGTGGDARRVLRLLRAVYHPRNRYLLHLDAGAAAGEREALARAVRRDEPAWREFRNVDIVGEAYAVDRTGSSALAAVLHGAAVLPRIGAHWDWLI TLSAEDYPLVTQEDLLYAFSFVPRDLNFIDHTSELGWKRHERFEKIIVDPSLYTDRNTEPFPSKEIRQMPDTFQIFTGSPWVILSRNFAEHCVHGWDNLP RKLLMYFANTAYSVESYFQTLICNSSDFLNTIVNGDLRYFVWDDPPGLDPLVLNE |
Full Sequence |
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Protein Sequence Length: 408 Download |
MRPRRLPPCL AVAALSAALL FLLLLLCASS SSPALFAWRS SAASRPAPPR AEWGPGRPPS 60 FAYWISGTGG DARRVLRLLR AVYHPRNRYL LHLDAGAAAG EREALARAVR RDEPAWREFR 120 NVDIVGEAYA VDRTGSSALA AVLHGAAVLP RIGAHWDWLI TLSAEDYPLV TQEDLLYAFS 180 FVPRDLNFID HTSELGWKRH ERFEKIIVDP SLYTDRNTEP FPSKEIRQMP DTFQIFTGSP 240 WVILSRNFAE HCVHGWDNLP RKLLMYFANT AYSVESYFQT LICNSSDFLN TIVNGDLRYF 300 VWDDPPGLDP LVLNESHFEN MLNSSAAFAR RFEEDTPVLK KMDDELLNRS PVQLVPGVWC 360 PNLGKEQNGT DVDLCSKWGD INTVRPGRGG ERLRQFISEI SQARGCH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 4.0e-41 | 61 | 322 | 266 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-95 | 59 | 400 | 342 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABR16364.1 | 0 | 54 | 397 | 68 | 406 | unknown [Picea sitchensis] |
DDBJ | BAF14321.2 | 0 | 58 | 406 | 60 | 400 | Os04g0301700 [Oryza sativa Japonica Group] |
EMBL | CAE04680.2 | 0 | 58 | 406 | 60 | 423 | OSJNBb0018A10.9 [Oryza sativa (japonica cultivar-group)] |
EMBL | CAH66076.1 | 0 | 58 | 406 | 60 | 400 | H0215E01.4 [Oryza sativa (indica cultivar-group)] |
RefSeq | NP_001052407.1 | 0 | 58 | 406 | 60 | 400 | Os04g0301700 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000002 | 77 | 282 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000002 | 77 | 282 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000002 | 77 | 282 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000002 | 77 | 282 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000007 | 77 | 282 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |