| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00063330m |
| Family | GH1 |
| Protein Properties | Length: 593 Molecular Weight: 66199.4 Isoelectric Point: 6.4674 |
| Chromosome | Chromosome/Scaffold: 002166 Start: 12666 End: 16095 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH1 | 175 | 552 | 0 |
| HNVAAWHNVPCPQERLKFWSDPDTELKLAKETGISVFRMGIDWTRVMPKEPTDAEFKSSVNFAALERYRWIIQRVHEYGMKVMLTLFHHSLPPWAGEYGG WKMEKTVKYFMDFVRLVVDRVSDLVDYWVVFNEPHVFVMLTYCAGAWPGGDPNAIEVATSALPTGVYNQALHWMAIAHAEAYDYIHLKSKNGRKPIVGVA HHVSFTRPYGLFDVAAVTVANTLTLFPYIDSICDKLDFIGINYYGQEVISGPGLKLVDNDEYSESGRGVYPDGLFCILIQFNERYKSLNIPFLITENGVS DETDLIRKPYILEHLLAIYAAIIMGVRVLGYLFWTTSDNWEWADGYGPKFGLVAVDRANNLAREPRPSYYLFSKVVTT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 593 Download |
| MPLPAFLAAA AKLAVLVVAA ATAANAASFA RYRRRHLRRI PNPIDEAADP VADFRALPSA 60 GTGADDASDD GGFFFGLATA PAHVEDRLED AWLQFATEHS CDEKEAVRDH KTADAVMASA 120 AGDGGAQLAS RSRKEEKAGE GEKRKPLKVA MEAMLRGFEM FSEGGESDSG DNCSHNVAAW 180 HNVPCPQERL KFWSDPDTEL KLAKETGISV FRMGIDWTRV MPKEPTDAEF KSSVNFAALE 240 RYRWIIQRVH EYGMKVMLTL FHHSLPPWAG EYGGWKMEKT VKYFMDFVRL VVDRVSDLVD 300 YWVVFNEPHV FVMLTYCAGA WPGGDPNAIE VATSALPTGV YNQALHWMAI AHAEAYDYIH 360 LKSKNGRKPI VGVAHHVSFT RPYGLFDVAA VTVANTLTLF PYIDSICDKL DFIGINYYGQ 420 EVISGPGLKL VDNDEYSESG RGVYPDGLFC ILIQFNERYK SLNIPFLITE NGVSDETDLI 480 RKPYILEHLL AIYAAIIMGV RVLGYLFWTT SDNWEWADGY GPKFGLVAVD RANNLAREPR 540 PSYYLFSKVV TTGKITRQDR LCAWRELQQA AFQKKTRPFF RAVDKHGRMY AG* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02814 | PLN02814 | 8.0e-19 | 199 | 567 | 426 | + beta-glucosidase | ||
| PRK13511 | PRK13511 | 9.0e-23 | 199 | 555 | 438 | + 6-phospho-beta-galactosidase; Provisional | ||
| TIGR03356 | BGL | 9.0e-45 | 200 | 546 | 393 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 1.0e-47 | 197 | 552 | 412 | + Glycosyl hydrolase family 1. | ||
| COG2723 | BglB | 4.0e-59 | 200 | 556 | 413 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG27984.1 | 0 | 28 | 592 | 28 | 596 | SFR2 [Zea mays] |
| GenBank | ACL54550.1 | 0 | 28 | 592 | 28 | 596 | unknown [Zea mays] |
| GenBank | EAY81793.1 | 0 | 40 | 592 | 40 | 587 | hypothetical protein OsI_36965 [Oryza sativa Indica Group] |
| RefSeq | NP_001068463.1 | 0 | 40 | 592 | 40 | 588 | Os11g0683500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105868.1 | 0 | 28 | 592 | 28 | 597 | putative beta-glycosidase [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3apg_D | 2e-38 | 185 | 558 | 51 | 460 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 3apg_C | 2e-38 | 185 | 558 | 51 | 460 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 3apg_B | 2e-38 | 185 | 558 | 51 | 460 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 3apg_A | 2e-38 | 185 | 558 | 51 | 460 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 1vff_A | 4e-38 | 193 | 555 | 49 | 408 | A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
