| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00063349m |
| Family | AA1 |
| Protein Properties | Length: 535 Molecular Weight: 57681.8 Isoelectric Point: 6.8639 |
| Chromosome | Chromosome/Scaffold: 001224 Start: 1667 End: 3780 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 4 | 521 | 0 |
| AAVVEHTFYVGGMGISQLCMNSVVYTANQQLPGPTVEVSEGDTLVVHVVNGSPYPISLHWHGIFQLQSGWADGANMITQCPIQPSARFTYVFKVTGQEGT LWWHAHASMLRATIYGALIIKPRSGGYPFPPPHAEIPILLGEWWNRNVDDVEKDGLLTGLGPAKSDAFTINGSPGDQAPCGGAGMFQVEVESGRTYLLRI INAAVNAELFFRVAGHAFTVVAADASYTDPHPTDVIVVAPGQTVDALMAAAAAPGRYYMAARAFESATASTPPPFDTTSATAVLRYKGVPDYAPAAMPAL PPYADVVTAARFYWSLTGLVRPGDPVVPKTVDHSLVVAFGLEQASCAPDQTRCQRFSVLASMNRRSFQFPEKVSLLEALFRGVPNVYSEDFPGWPAPAAT RKATSVRKVNYNDVVEVVLQNEGYSRALGTANHPIHLHGFNFFVLAQGLGRFDPRMRSTYNLVNPQVRNTVAVPAGGWAVIRFTANNPGMWFMHCHLDSH LPLGLAMVFEVLNGPAPN | |||
| Full Sequence |
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| Protein Sequence Length: 535 Download |
| MASAAVVEHT FYVGGMGISQ LCMNSVVYTA NQQLPGPTVE VSEGDTLVVH VVNGSPYPIS 60 LHWHGIFQLQ SGWADGANMI TQCPIQPSAR FTYVFKVTGQ EGTLWWHAHA SMLRATIYGA 120 LIIKPRSGGY PFPPPHAEIP ILLGEWWNRN VDDVEKDGLL TGLGPAKSDA FTINGSPGDQ 180 APCGGAGMFQ VEVESGRTYL LRIINAAVNA ELFFRVAGHA FTVVAADASY TDPHPTDVIV 240 VAPGQTVDAL MAAAAAPGRY YMAARAFESA TASTPPPFDT TSATAVLRYK GVPDYAPAAM 300 PALPPYADVV TAARFYWSLT GLVRPGDPVV PKTVDHSLVV AFGLEQASCA PDQTRCQRFS 360 VLASMNRRSF QFPEKVSLLE ALFRGVPNVY SEDFPGWPAP AATRKATSVR KVNYNDVVEV 420 VLQNEGYSRA LGTANHPIHL HGFNFFVLAQ GLGRFDPRMR STYNLVNPQV RNTVAVPAGG 480 WAVIRFTANN PGMWFMHCHL DSHLPLGLAM VFEVLNGPAP NLLPPPPADY PKCH* 540 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 3.0e-43 | 18 | 128 | 113 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02835 | PLN02835 | 1.0e-43 | 18 | 496 | 493 | + oxidoreductase | ||
| PLN02604 | PLN02604 | 5.0e-59 | 22 | 513 | 528 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 2.0e-73 | 6 | 513 | 547 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 4 | 533 | 551 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD82649.1 | 0 | 8 | 492 | 25 | 511 | putative laccase LAC6-8 [Oryza sativa Japonica Group] |
| GenBank | EEC71812.1 | 0 | 8 | 534 | 25 | 553 | hypothetical protein OsI_04450 [Oryza sativa Indica Group] |
| RefSeq | NP_001044816.1 | 0 | 8 | 492 | 25 | 511 | Os01g0850800 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | Q0JHP8 | 0 | 8 | 534 | 25 | 553 | LAC8_ORYSJ RecName: Full=Laccase-8; AltName: Full=Benzenediol:oxygen oxidoreductase 8; AltName: Full=Urishiol oxidase 8; AltName: Full=Diphenol oxidase 8; Flags: Precursor |
| RefSeq | XP_002456641.1 | 0 | 1 | 534 | 21 | 557 | hypothetical protein SORBIDRAFT_03g039980 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 22 | 512 | 19 | 521 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1asq_A | 0 | 22 | 512 | 19 | 521 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1asp_B | 0 | 22 | 512 | 19 | 521 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1asp_A | 0 | 22 | 512 | 19 | 521 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aso_B | 0 | 22 | 512 | 19 | 521 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HX146138 | 242 | 6 | 245 | 0 |
| CX607272 | 215 | 1 | 213 | 0 |
| HO797675 | 493 | 59 | 533 | 0 |
| FC884996 | 249 | 1 | 248 | 0 |
| DY274516 | 249 | 1 | 248 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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