| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00063645m |
| Family | GT29 |
| Protein Properties | Length: 395 Molecular Weight: 42897.5 Isoelectric Point: 10.1049 |
| Chromosome | Chromosome/Scaffold: 0223037 Start: 606 End: 1790 |
| Description | Glycosyltransferase family 29 (sialyltransferase) family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT29 | 156 | 371 | 0 |
| RPRRFPTCAVVGNSGVLLGSGRGAQIDAHDLVVRLNNARVAGYAADVGAKASLSFVNSNILHYCAVRSAVATGGCACHPYGRAVPMAMYVCQPAHLLDAL ICNATATPASPFPLLVTDARLDALTARIAKYYSLRRFVATTGEPASNWTRRHDERYFHYSSGLQAVVMALGVCFEVSLFGFGKAAGAKHHYHTNQKKELD LHDYEAEYQFYHDLQA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 395 Download |
| MKRRHHLLPV LVLLALSLLA LPYRRHLFLP RGPSQYPAGG ADELLRRLAA SDAGGDQVLA 60 EAAALLANAS VISFPSIGNR YRLLYLRLPH RGNGSTSAPR QRAVSRLRVP FVTVPDDGPL 120 LAAFRASLRS FVLAHRLRRG SNVAAVMGDL AGLLGRPRRF PTCAVVGNSG VLLGSGRGAQ 180 IDAHDLVVRL NNARVAGYAA DVGAKASLSF VNSNILHYCA VRSAVATGGC ACHPYGRAVP 240 MAMYVCQPAH LLDALICNAT ATPASPFPLL VTDARLDALT ARIAKYYSLR RFVATTGEPA 300 SNWTRRHDER YFHYSSGLQA VVMALGVCFE VSLFGFGKAA GAKHHYHTNQ KKELDLHDYE 360 AEYQFYHDLQ ARPETVPFLD EAPGFKVPPV KLYW* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00777 | Glyco_transf_29 | 1.0e-17 | 149 | 369 | 233 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008373 | sialyltransferase activity |
| GO:0030173 | integral to Golgi membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN30607.1 | 0 | 65 | 394 | 1 | 340 | unknown [Zea mays] |
| GenBank | EAY82275.1 | 0 | 1 | 393 | 1 | 395 | hypothetical protein OsI_37484 [Oryza sativa Indica Group] |
| RefSeq | NP_001066170.1 | 0 | 1 | 394 | 1 | 396 | Os12g0151500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001150867.1 | 0 | 1 | 394 | 1 | 402 | sialyltransferase-like protein [Zea mays] |
| RefSeq | XP_002449004.1 | 0 | 1 | 394 | 1 | 400 | hypothetical protein SORBIDRAFT_05g003160 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wml_A | 0.00000000000002 | 163 | 350 | 100 | 262 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 2wnf_A | 0.00000000000002 | 163 | 350 | 100 | 262 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 2wnb_A | 0.00000000000002 | 163 | 350 | 100 | 262 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
