| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00063725m |
| Family | AA1 |
| Protein Properties | Length: 405 Molecular Weight: 43981.3 Isoelectric Point: 8.65 |
| Chromosome | Chromosome/Scaffold: 0221456 Start: 4 End: 1218 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA1 | 3 | 393 | 0 |
| ILLGEWWNASVVDVERQALLAGGAPNNSVALTINGLMGGYRLTVERGRTYLLRIVNAALNYQLFFKVAAHSFTVVAADACYTDPYETDVIAIAPGQTVDA LMRADAHPGRRYYMAAQVYQSLANATYSATTTALVTYYQGRRRPATTMMPSMPAFNDSATAQGFYASLTGLLQDGTPTVPLHVDTRMLVTFGLGVTPCAP AQTLCNRTRGSVAASMNNVSFQFPTAMSLLEARMRRRAGVYTRDFPDRPPVMFDFTSSAASADRALMATAKGTKVKALRYKETVEVVLQNTAILGAENHP LHLHGFNFYVLEQGVGNFNAYRHVRTYNLINPHQRNTVAVPAGGWAAIRFTADNPGMWIMHCHLDTHLPFGLAMAFEVDDGPTPDCSSPAA | |||
| Full Sequence |
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| Protein Sequence Length: 405 Download |
| ATILLGEWWN ASVVDVERQA LLAGGAPNNS VALTINGLMG GYRLTVERGR TYLLRIVNAA 60 LNYQLFFKVA AHSFTVVAAD ACYTDPYETD VIAIAPGQTV DALMRADAHP GRRYYMAAQV 120 YQSLANATYS ATTTALVTYY QGRRRPATTM MPSMPAFNDS ATAQGFYASL TGLLQDGTPT 180 VPLHVDTRML VTFGLGVTPC APAQTLCNRT RGSVAASMNN VSFQFPTAMS LLEARMRRRA 240 GVYTRDFPDR PPVMFDFTSS AASADRALMA TAKGTKVKAL RYKETVEVVL QNTAILGAEN 300 HPLHLHGFNF YVLEQGVGNF NAYRHVRTYN LINPHQRNTV AVPAGGWAAI RFTADNPGMW 360 IMHCHLDTHL PFGLAMAFEV DDGPTPDCSS PAAATRLSPV LMLI* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07731 | Cu-oxidase_2 | 1.0e-41 | 246 | 384 | 141 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 6.0e-42 | 44 | 378 | 339 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 4.0e-51 | 42 | 379 | 343 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 4.0e-58 | 2 | 379 | 416 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 3.0e-150 | 1 | 386 | 397 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEE66417.1 | 0 | 2 | 387 | 135 | 534 | hypothetical protein OsJ_22767 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q69L99 | 0 | 2 | 387 | 171 | 570 | LAC14_ORYSJ RecName: Full=Laccase-14; AltName: Full=Benzenediol:oxygen oxidoreductase 14; AltName: Full=Urishiol oxidase 14; AltName: Full=Diphenol oxidase 14; Flags: Precursor |
| RefSeq | XP_002308196.1 | 0 | 3 | 397 | 160 | 559 | laccase 110a [Populus trichocarpa] |
| RefSeq | XP_002461291.1 | 0 | 1 | 387 | 156 | 549 | hypothetical protein SORBIDRAFT_02g000300 [Sorghum bicolor] |
| RefSeq | XP_002527888.1 | 0 | 3 | 397 | 133 | 537 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 9e-37 | 42 | 378 | 204 | 521 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 1asq_A | 9e-37 | 42 | 378 | 204 | 521 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 1asp_B | 9e-37 | 42 | 378 | 204 | 521 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 1asp_A | 9e-37 | 42 | 378 | 204 | 521 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 1aso_B | 9e-37 | 42 | 378 | 204 | 521 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO797675 | 399 | 3 | 389 | 0 |
| CI142885 | 193 | 200 | 387 | 0 |
| DY941206 | 306 | 53 | 356 | 0 |
| EG377960 | 229 | 177 | 403 | 0 |
| DY271840 | 341 | 22 | 346 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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