Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00063916m |
Family | GH100 |
Protein Properties | Length: 411 Molecular Weight: 46766.8 Isoelectric Point: 6.2644 |
Chromosome | Chromosome/Scaffold: 022371 Start: 3239 End: 5703 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 1 | 380 | 0 |
MDCYSPGQGLMPASFKVRSVPLDGNSEAFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLSDGFDMFPTLLV TDGSCMIDRRMGIHGHPLEIQALFYSALRCAREMIGVNDGSKNLIRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSHDAINKFNIYPEQIPSWL ADWIPVRGGYLIGNLQPAHMDFRFFSLGNLWAIVSSLATQRQAEGILNLIEAKWDDIVANMPLKICYPALEYEEWRIITGSDPKNTPWSYHNGGSWPTLL WQFTLACIKMGRRDLARKAVEVAEKRLSDDKWPEYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPEMASILICDED |
Full Sequence |
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Protein Sequence Length: 411 Download |
MDCYSPGQGL MPASFKVRSV PLDGNSEAFE EVLDPDFGES AIGRVAPVDS GLWWIILLRA 60 YGKITGDYAL QERVDVQTGI RLILNLCLSD GFDMFPTLLV TDGSCMIDRR MGIHGHPLEI 120 QALFYSALRC AREMIGVNDG SKNLIRAINN RLSALSFHIR EYYWVDMKKI NEIYRYKTEE 180 YSHDAINKFN IYPEQIPSWL ADWIPVRGGY LIGNLQPAHM DFRFFSLGNL WAIVSSLATQ 240 RQAEGILNLI EAKWDDIVAN MPLKICYPAL EYEEWRIITG SDPKNTPWSY HNGGSWPTLL 300 WQFTLACIKM GRRDLARKAV EVAEKRLSDD KWPEYYDTRT GRFIGKQSRL YQTWTIAGYL 360 SSKMLLDCPE MASILICDED FELLEGCACS LNKSARTKCS RRAAKSQVLV * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 0.0001 | 276 | 364 | 92 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
PLN03005 | PLN03005 | 1.0e-174 | 1 | 380 | 380 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 5.0e-175 | 1 | 383 | 383 | + beta-fructofuranosidase | ||
PLN02703 | PLN02703 | 0 | 1 | 410 | 410 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 1 | 369 | 369 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC75120.1 | 0 | 1 | 407 | 219 | 625 | hypothetical protein OsI_11302 [Oryza sativa Indica Group] |
RefSeq | NP_001042931.1 | 0 | 1 | 409 | 220 | 627 | Os01g0332100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001049936.1 | 0 | 1 | 410 | 219 | 628 | Os03g0314800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002280462.1 | 0 | 1 | 410 | 263 | 672 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002465359.1 | 0 | 1 | 410 | 217 | 626 | hypothetical protein SORBIDRAFT_01g037120 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO811217 | 412 | 1 | 411 | 0 |
HO779905 | 409 | 3 | 411 | 0 |
GT033923 | 322 | 42 | 363 | 0 |
DV161952 | 316 | 1 | 316 | 0 |
JG870017 | 272 | 1 | 272 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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