y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00064077m |
Family | CE13 |
Protein Properties | Length: 415 Molecular Weight: 45731.1 Isoelectric Point: 6.4108 |
Chromosome | Chromosome/Scaffold: 022459 Start: 5072 End: 7799 |
Description | Pectinacetylesterase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE13 | 44 | 392 | 0 |
PELVELTLLAGAREKGAVCLDGSPPGYHLQRGFGSGAHNWLVYLQGGGWCNTTESCSERKMTEFGSSKLMEAVEFTGILSNRHQENPDFHNWNIVVIRYC DGASFAGDAEGEDQDGTKLFFRGLRIWEAVVDELMAKGMDTAKQALLTGCSAGSLAALLHCDNFRERFPQDVSIKCLSDAGFFIDEKDLSGERSLRTLIN AIVHLQNVREALPKGCLANKDPTECFFPAELIKSINTPTFILNSDYDSWQIRNALAPNGSYPGQAWSSCKADIRNCSSTQMDILHGFRKKLVSELKVAED KRDWGLFIDSCFTHCQSPFRISWISRISPRLGNKTIAEAVGDWYFGRRE |
Full Sequence |
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Protein Sequence Length: 415 Download |
MATELLSPLL PQRCRGLSVA AAAPLLLLLA VVTFSCSPVA PRAPELVELT LLAGAREKGA 60 VCLDGSPPGY HLQRGFGSGA HNWLVYLQGG GWCNTTESCS ERKMTEFGSS KLMEAVEFTG 120 ILSNRHQENP DFHNWNIVVI RYCDGASFAG DAEGEDQDGT KLFFRGLRIW EAVVDELMAK 180 GMDTAKQALL TGCSAGSLAA LLHCDNFRER FPQDVSIKCL SDAGFFIDEK DLSGERSLRT 240 LINAIVHLQN VREALPKGCL ANKDPTECFF PAELIKSINT PTFILNSDYD SWQIRNALAP 300 NGSYPGQAWS SCKADIRNCS STQMDILHGF RKKLVSELKV AEDKRDWGLF IDSCFTHCQS 360 PFRISWISRI SPRLGNKTIA EAVGDWYFGR REEVKYIDCK YPCNPTCSSH LPTA* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03283 | PAE | 0 | 42 | 392 | 352 | + Pectinacetylesterase. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY76796.1 | 0 | 2 | 413 | 4 | 409 | hypothetical protein OsI_04753 [Oryza sativa Indica Group] |
GenBank | EEC71941.1 | 0 | 42 | 412 | 25 | 395 | hypothetical protein OsI_04755 [Oryza sativa Indica Group] |
GenBank | EEE55792.1 | 0 | 2 | 413 | 4 | 415 | hypothetical protein OsJ_04376 [Oryza sativa Japonica Group] |
RefSeq | NP_001045060.1 | 0 | 2 | 413 | 4 | 423 | Os01g0892400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001045062.1 | 0 | 42 | 412 | 25 | 395 | Os01g0892600 [Oryza sativa (japonica cultivar-group)] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CT844176 | 421 | 42 | 412 | 0 |
GD029270 | 236 | 155 | 390 | 0 |
FE610118 | 250 | 8 | 257 | 0 |
JG903413 | 271 | 118 | 388 | 0 |
JG903413 | 35 | 381 | 415 | 0.001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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