y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00064104m |
Family | GH1 |
Protein Properties | Length: 218 Molecular Weight: 24574.9 Isoelectric Point: 5.9454 |
Chromosome | Chromosome/Scaffold: 0221617 Start: 414 End: 2068 |
Description | beta glucosidase 42 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 6 | 217 | 0 |
ERVLDRSNGDIAVDHYHRYREDIELMASLGFRAYRFSISWARIFPDGLGGKVNEQGVAFYNNLINFMIAKGIEPYATLYHWDLPNNLQKTLGGWISEKIV DYFALYAEACFANFGDRVKRWITINEPLQTSVNAYGIGVFAPGGCEGETARCYLAAHHQILAHAAAVDVYRRKFKAAQGGEVGLVVDCEWAEPFSEKAED QIAAQRRIDFQL |
Full Sequence |
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Protein Sequence Length: 218 Download |
MLLLSERVLD RSNGDIAVDH YHRYREDIEL MASLGFRAYR FSISWARIFP DGLGGKVNEQ 60 GVAFYNNLIN FMIAKGIEPY ATLYHWDLPN NLQKTLGGWI SEKIVDYFAL YAEACFANFG 120 DRVKRWITIN EPLQTSVNAY GIGVFAPGGC EGETARCYLA AHHQILAHAA AVDVYRRKFK 180 AAQGGEVGLV VDCEWAEPFS EKAEDQIAAQ RRIDFQLG 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 7.0e-52 | 10 | 218 | 218 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 9.0e-55 | 10 | 218 | 219 | + beta-glucosidase | ||
COG2723 | BglB | 3.0e-71 | 6 | 216 | 211 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 8.0e-76 | 7 | 214 | 208 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 2.0e-79 | 6 | 218 | 214 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC71957.1 | 0 | 5 | 218 | 51 | 264 | hypothetical protein OsI_04787 [Oryza sativa Indica Group] |
RefSeq | NP_001031975.1 | 0 | 7 | 218 | 59 | 270 | BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_001045089.1 | 0 | 5 | 218 | 51 | 264 | Os01g0897600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146483.1 | 0 | 6 | 218 | 52 | 264 | hypothetical protein LOC100280071 [Zea mays] |
RefSeq | XP_002456785.1 | 0 | 6 | 218 | 177 | 389 | hypothetical protein SORBIDRAFT_03g042690 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 7 | 218 | 55 | 275 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3gnp_A | 0 | 7 | 218 | 55 | 275 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3gno_A | 0 | 7 | 218 | 55 | 275 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3scs_B | 0 | 8 | 218 | 59 | 274 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3scs_A | 0 | 8 | 218 | 59 | 274 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL711428 | 214 | 5 | 218 | 0 |
BE361086 | 208 | 11 | 218 | 0 |
CN129314 | 203 | 6 | 208 | 0 |
DR970424 | 212 | 6 | 217 | 0 |
JG945195 | 212 | 6 | 217 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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